Skip to main content

Advertisement

Log in

Efficiency of Protease-Activatable Virus Nanonodes Tuned Through Incorporation of Wild-Type Capsid Subunits

  • Published:
Cellular and Molecular Bioengineering Aims and scope Submit manuscript

Abstract

Virus nanonodes, a tunable multi-input protease-responsive gene delivery platform, was recently built by exploiting the self-assembly property of adeno-associated virus capsids. Upon detection of specific inputs (e.g., matrix metalloproteinases—MMPs), the engineered viruses output gene delivery to targeted cells. The first generation protease-activatable viruses (PAVs) displayed the desired protease-activated cellular receptor binding and transduction behaviors. However, the less than wild type (WT) level of gene delivery achieved by the prototype viruses has left room for improvement. In this report, we have devised a method to tackle this efficiency problem. Specifically, by controlling the ratio of WT to protease-activatable subunits in the assembled 60-mer virus capsid, we can easily increase the level of overall transduction achieved by the PAVs. Since a number of MMPs are overexpressed in a vast range of human pathologies, including cancer and cardiovascular disease, the protease-sensing viruses may find broad clinical use in future gene therapy applications.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Figure 1
Figure 2
Figure 3
Figure 4
Figure 5
Figure 6
Figure 7
Figure 8

Similar content being viewed by others

References

  1. Asuri, P., M. A. Bartel, T. Vazin, J.-H. Jang, T. B. Wong, and D. V. Schaffer. Directed evolution of adeno-associated virus for enhanced gene delivery and gene targeting in human pluripotent stem cells. Mol. Ther. 20:329–338, 2012.

    Article  Google Scholar 

  2. Carlisle, R. C., R. Benjamin, S. S. Briggs, et al. Coating of adeno-associated virus with reactive polymers can ablate virus tropism, enable retargeting and provide resistance to neutralising antisera. J. Gene Med. 10:400–411, 2008.

    Article  Google Scholar 

  3. Chaffer, C. L., and R. A. Weinberg. A perspective on cancer cell metastasis. Science 331:1559–1564, 2011.

    Article  Google Scholar 

  4. Crawford, H. C., and L. M. Matrisian. Tumor and stromal expression of matrix metalloproteinases and their role in tumor progression. Invasion Metastasis 14:234–245, 1994.

    Google Scholar 

  5. Egeblad, M., and Z. Werb. New functions for the matrix metalloproteinases in cancer progression. Nat. Rev. Cancer. 2:161–174, 2002.

    Article  Google Scholar 

  6. Flotte, T. R., M. L. Brantly, L. T. Spencer, et al. Phase I trial of intramuscular injection of a recombinant adeno-associated virus alpha 1-antitrypsin (raav2-cb-haat) gene vector to aat-deficient adults. Hum. Gene Ther. 15:93–128, 2004.

    Article  Google Scholar 

  7. Hauck, B., L. Chen, and W. Xiao. Generation and characterization of chimeric recombinant AAV vectors. Mol. Ther. 7:419–425, 2003.

    Article  Google Scholar 

  8. Himelstein, B. P., R. Canete-Soler, E. J. Bernhard, D. W. Dilks, and R. J. Muschel. Metalloproteinases in tumor progression: the contribution of MMP-9. Invasion Metastasis 14:246–258, 1994.

    Google Scholar 

  9. Ho, M. L., B. A. Adler, M. L. Torre, J. J. Silberg, and J. Suh. Schema computational design of virus capsid chimeras: calibrating how genome packaging, protection, and transduction correlate with calculated structural disruption. ACS Synth. Biol. 2:724–733, 2013.

  10. Horowitz, E. D., M. S. Weinberg, and A. Asokan. Glycated aav vectors: chemical redirection of viral tissue tropism. Bioconjug. Chem. 22:529–532, 2011.

    Article  Google Scholar 

  11. Jang, J.-H., J. T. Koerber, J.-S. Kim, et al. An evolved adeno-associated viral variant enhances gene delivery and gene targeting in neural stem cells. Mol. Ther. 19:667–675, 2011.

    Article  Google Scholar 

  12. Jones, C. B., D. C. Sane, and D. M. Herrington. Matrix metalloproteinases: a review of their structure and role in acute coronary syndrome. Cardiovasc. Res. 59:812–823, 2003.

    Article  Google Scholar 

  13. Judd, J., M. L. Ho, A. Tiwari, et al. Tunable protease-activatable virus nanonodes. ACS Nano. 2014. doi:10.1021/nn500550q.

  14. Judd, J., F. Wei, P. Q. Nguyen, et al. Random insertion of mcherry into vp3 domain of adeno-associated virus yields fluorescent capsids with no loss of infectivity. Mol. Ther. Nucleic Acids 1:e54, 2012.

    Article  Google Scholar 

  15. Kaplitt, M. G., A. Feigin, C. Tang, et al. Safety and tolerability of gene therapy with an adeno-associated virus (AAV) borne gad gene for Parkinson’s disease: an open label, phase I trial. Lancet 369:2097–2105, 2007.

    Article  Google Scholar 

  16. Liu, Y., Y. Fang, Y. Zhou, et al. Site-specific modification of adeno-associated viruses via a genetically engineered aldehyde tag. Small 9:421–429, 2013.

    Article  Google Scholar 

  17. Maclaren, R. E., M. Groppe, A. R. Barnard, et al. Retinal gene therapy in patients with choroideremia: initial findings from a phase 1/2 clinical trial. Lancet 6736:1–9, 2014.

    Google Scholar 

  18. Maguire, C. A., D. Gianni, D. H. Meijer, et al. Directed evolution of adeno-associated virus for glioma cell transduction. J. Neurooncol. 96:337–347, 2010.

    Article  Google Scholar 

  19. Mueller, C., and T. R. Flotte. Clinical gene therapy using recombinant adeno-associated virus vectors. Gene Ther. 15:858–863, 2008.

    Article  Google Scholar 

  20. Nicklin, S. A., H. Buening, K. L. Dishart, et al. Efficient and selective AAV2-mediated gene transfer directed to human vascular endothelial cells. Mol. Ther. 4:174–181, 2001.

    Article  Google Scholar 

  21. O’Donnell, J., K. A. Taylor, and M. S. Chapman. Adeno-associated virus-2 and its primary cellular receptor—cryo-em structure of a heparin complex. Virology 385:434–443, 2009.

    Article  Google Scholar 

  22. Opie, S. R., K. H. Warrington, M. Agbandje-McKenna, S. Zolotukhin, and N. Muzyczka. Identification of amino acid residues in the capsid proteins of adeno-associated virus type 2 that contribute to heparan sulfate proteoglycan binding. J. Virol. 77:6995–7006, 2003.

    Article  Google Scholar 

  23. Pajusola, K., M. Gruchala, H. Joch, T. F. Lüscher, S. Ylä-Herttuala, and H. Büeler. Cell-type-specific characteristics modulate the transduction efficiency of adeno-associated virus type 2 and restrain infection of endothelial cells. J. Virol. 76:11530–11540, 2002.

    Article  Google Scholar 

  24. Peng, K. W., F. J. Morling, F. L. Cosset, G. Murphy, and S. J. Russell. A gene delivery system activatable by disease-associated matrix metalloproteinases. Hum. Gene Ther. 8:729–738, 1997.

    Article  Google Scholar 

  25. Ponnazhagan, S., G. Mahendra, S. Kumar, J. A. Thompson, and M. Castillas. Conjugate-based targeting of recombinant adeno-associated virus type 2 vectors by using avidin-linked ligands. J. Virol. 76:12900–12907, 2002.

    Article  Google Scholar 

  26. Rabinowitz, J. E., D. E. Bowles, S. M. Faust, J. G. Ledford, S. E. Cunningham, and R. J. Samulski. Cross-dressing the virion: the transcapsidation of adeno-associated virus serotypes functionally defines subgroups. J. Virol. 78:4421–4432, 2004.

    Article  Google Scholar 

  27. Rosenberg, G. A. Matrix metalloproteinases in neuroinflammation. Glia 39:279–291, 2002.

    Article  Google Scholar 

  28. Rosenberg, G. A. Matrix metalloproteinases and their multiple roles in neurodegenerative diseases. Lancet Neurol. 8:205–216, 2009.

    Article  Google Scholar 

  29. Savariar, E. N., C. N. Felsen, N. Nashi, et al. Real-time in vivo molecular detection of primary tumors and metastases with ratiometric activatable cell-penetrating peptides. Cancer Res. 73:855–864, 2013.

    Article  Google Scholar 

  30. Singh, R. B., S. P. Dandekar, V. Elimban, S. K. Gupta, and N. S. Dhalla. Role of proteases in the pathophysiology of cardiac disease. Mol. Cell. Biochem. 263:241–256, 2004.

    Article  Google Scholar 

  31. Springfeld, C., V. von Messling, M. Frenzke, G. Ungerechts, C. J. Buchholz, and R. Cattaneo. Oncolytic efficacy and enhanced safety of measles virus activated by tumor-secreted matrix metalloproteinases. Cancer Res. 66:7694–7700, 2006.

    Article  Google Scholar 

  32. Xie, Q., W. Bu, S. Bhatia, et al. The atomic structure of adeno-associated virus (AAV-2), a vector for human gene therapy. Proc. Natl. Acad. Sci. USA 99:10405–10410, 2002.

    Article  Google Scholar 

  33. Yang, L., J. Jiang, L. M. Drouin, et al. A myocardium tropic adeno-associated virus (AAV) evolved by dna shuffling and in vivo selection. Proc. Natl. Acad. Sci. USA 106:3946–3951, 2009.

    Article  Google Scholar 

  34. Zouridakis, E., P. Avanzas, R. Arroyo-Espliguero, S. Fredericks, and J. C. Kaski. Markers of inflammation and rapid coronary artery disease progression in patients with stable angina pectoris. Circulation 110:1747–1753, 2004.

    Article  Google Scholar 

Download references

Acknowledgments

We would like to thank Shridhar Jayanthi for scientific discussions. The authors would like to acknowledge the University of North Carolina at Chapel Hill Gene Therapy Center Vector Core for providing us with pXX2, pXX6-80, and scAAV2-CMV-GFP. This material is based upon work supported by the National Science Foundation under Grant Number 0955536, Cancer Prevention Research Institute of Texas under grant number RP130455, and American Heart Association under grant number 13GRNT14420044 to J.S.

Conflict of interest

MLH, JJ, BEK, MY, FFW, JS declare that they have no conflicts of interest.

Etichal Standards

No human studies or animal studies were carried out by the authors for this article.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Junghae Suh.

Additional information

Associate Editor David Schaffer oversaw the review of this article.

This paper is part of the 2014 Young Innovators Issue.

Dr. Junghae Suh received her S.B. in Chemical Engineering at MIT and Ph.D. in Biomedical Engineering at Johns Hopkins School of Medicine. Before joining the Rice University department of Bioengineering as an assistant professor in 2007, she completed a two-year postdoctoral fellowship in the Laboratory of Genetics at the Salk Institute for Biological Studies. Her graduate research focused on understanding the interaction of nanoscale systems, either nature-derived or human-engineered, with complex biological environments in an effort to discover ruling paradigms that govern the performance of nanoparticles designed for biomedicine. Her postdoctoral research focused on studying how natural viruses interface with cellular machinery, particularly those that maintain homeostasis in the cell nucleus. Such studies should uncover new insights into how synthetic nanoparticle systems can be designed to yield the performance efficiencies rivaling that of viruses. Currently, Dr. Suh works at the interface of virology, biophysics, molecular biology, and protein engineering to investigate and create novel virus-based materials for various biomedical applications.

figure a

Electronic supplementary material

Below is the link to the electronic supplementary material.

Supplementary material 1 (PDF 42 kb)

Rights and permissions

Reprints and permissions

About this article

Check for updates. Verify currency and authenticity via CrossMark

Cite this article

Ho, M.L., Judd, J., Kuypers, B.E. et al. Efficiency of Protease-Activatable Virus Nanonodes Tuned Through Incorporation of Wild-Type Capsid Subunits. Cel. Mol. Bioeng. 7, 334–343 (2014). https://doi.org/10.1007/s12195-014-0334-y

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s12195-014-0334-y

Keywords

Navigation