Abstract
Rational approach towards the QSAR/QSPR modeling requires the selection of descriptors to be computationally efficient and physically and chemically meaningful. However, fullerenes and their derivatives represent challenging compounds in terms of QSPR modeling and there is a lack of efficient and comprehensible descriptors for them. Based on existing informational field model and simplex representation of molecular structure approach, an outline of descriptoral representation for fullerenes was developed. Solubility of fullerene derivatives was chosen as target property for the estimation of descriptors’ efficacy. Developed model provides well-defined physical meanings and obtained results are interpreted in terms of basic molecular properties.
Similar content being viewed by others
References
H.W. Kroto, J.R. Heath, S.C. O’Brien, R.F. Curl, R.E. Smalley, Nature 318, 162 (1985)
K.N. Semenov, N.A. Charykov, V.A. Keskinov, A.K. Piartman, A.A. Blokhin, A.A. Kopyrin, J. Chem. Eng. Data 55, 13 (2010)
T. Le, V.C. Epa, F.R. Burden, D.A. Winkler, Chem. Rev. 112, 2889 (2012)
T. Reti, E. Bitay, Mater. Sci. Forum 537, 439 (2007)
K. Choho, W. Langenaeker, G. Van De Woude, P. Geerlings, J. Mol. Struct. 338, 293 (1995)
A. Toropova, A. Toropov, E. Benfenati, G. Gini, D. Leszczynska, J. Leszczynski, Mol. Divers. 15, 249 (2011)
A.A. Toropov, A.P. Toropova, E. Benfenati, D. Leszczynska, J. Leszczynski, J. Comput. Chem. 31, 381 (2010)
C.W. Yap, J. Comput. Chem. 32, 1466 (2011)
A. Mauri, V. Consonni, M. Pavan, R. Todeschini, Match-Commun. Math. Co. 56, 237 (2006)
F. Ruggiu, G. Marcou, A. Varnek, D. Horvath, Mol. Inf. 29, 855 (2010)
P. Tosco, T. Balle, J. Mol. Model. 17, 201 (2011)
V.E. Kuz’min, L.N. Ognichenko, A.G. Artemenko, Mol. Model. 7, 278 (2001)
V.E. Kuz’min, A.G. Artemenko, E.N. Muratov, J. Comput.-Aided Des. 22, 403 (2008)
D. Aleksandrova, A. Yegorova, L.N. Ognichenko, Y.V. Scripinets, I.V. Ukrainets, V.E. Kuz’min, V.P. Antonovich, Metody i Ob’ekty Khimicheskogo Analiza 3, 50 (2008)
L.N. Ognichenko, V.E. Kuz’min, A.G. Artemenko, QSAR Comb. Sci. 28, 939 (2009)
T.D. Schneider, Nano Commun. Netw. 1, 173 (2010)
V.E. Kuz’min, A.G. Artemenko, R.N. Lozytska, A.S. Fedtchouk, V.P. Lozitsky, E.N. Muratov, A.K. Mescheriakov, SAR QSAR Environ. Res. 16, 219 (2005)
A.G. Artemenko, E.N. Muratov, V.E. Kuz’min, N.N. Muratov, E.V. Varlamova, A.V. Kuz’mina, L.G. Gorb, A. Golius, F.C. Hill, J. Leszczynski, A. Tropsha, SAR QSAR Environ. Res. 22, 575 (2011)
A.K. Rappe, C.J. Casewit, K.S. Colwell, W.A. Goddard, W.M. Skiff, J. Am. Chem. Soc. 114, 10024 (1992)
W.L. Jolly, W.B. Perry, J. Am. Chem. Soc. 95, 5442 (1973)
A. Artemenko, HiT QSAR Software. http://www.qsar4u.com/)
S. Wold, J. Trygg, A. Berglund, H. Antti, Chemom. Intell. Lab. 58, 131 (2001)
K.E. Hevener, D.M. Ball, J.K. Buolamwini, R.E. Lee, Bioorgan Med. Chem. 16, 8042 (2008)
P. Gramatica, E. Papa, QSAR Comb. Sci. 24, 953 (2005)
P.A. Troshin, H. Hoppe, J. Renz, M. Egginger, J.Y. Mayorova, A.E. Goryachev, A.S. Peregudov, R.N. Lyubovskaya, G. Gobsch, N.S. Sariciftci, V.F. Razumov, Adv. Func. Mater. 19, 779 (2009)
A.H. Asikainen, J. Ruuskanen, K.A. Tuppurainen, SAR QSAR Environ. Res. 15, 19 (2004)
M.T. Beck, G. Mándi, Fuller. Sci. Tech. 5, 291 (1997)
J.J.P. Stewart, J. Mol. Model. 19, 1 (2013)
Acknowledgments
This work was financially supported by National Science Foundation: NSF-CREST Grant #HRD-0833178 and EPSCoR Grant #362492-190200-01\(\backslash \)NSFEPS-0903787. Authors also thank Office of Naval Research: Grant # N00014-13-1-0501.
Author information
Authors and Affiliations
Corresponding author
Rights and permissions
About this article
Cite this article
Sizochenko, N., Kuz’min, V., Ognichenko, L. et al. Introduction of simplex-informational descriptors for QSPR analysis of fullerene derivatives. J Math Chem 54, 698–706 (2016). https://doi.org/10.1007/s10910-015-0581-8
Received:
Accepted:
Published:
Issue Date:
DOI: https://doi.org/10.1007/s10910-015-0581-8