Skip to main content

Advertisement

Log in

A new isolate of beak and feather disease virus from endemic wild red-fronted parakeets (Cyanoramphus novaezelandiae) in New Zealand

  • Annotated Sequence Record
  • Published:
Archives of Virology Aims and scope Submit manuscript

Abstract

Psittacine beak and feather disease (PBFD) is a viral disease distributed worldwide with a potentially critical impact on many rare parrots. While efforts have been made to determine its prevalence in wild and captive psittacines, only limited work has been done to document complete genomes of its causative agent, beak and feather disease virus (BFDV). Here, we describe five full genomes of BFDV isolated from wild specimens of an endemic New Zealand parrot, the red-fronted parakeet (Cyanoramphus novaezelandiae). The isolates share >99% nucleotide similarity amongst themselves and ~91–92% similarity to BFDV isolates from southern Africa, Europe and Australia. A maximum-likelihood (ML) phylogenetic tree including 42 other full-genome sequences indicated that the five isolates from red-fronted parakeets represent an undescribed genotype of BFDV. These isolates are evolutionarily most closely related to the Cacatuini isolates from Thailand and the Lorinae isolates from Australia in the rep gene ML tree; however, in the cp ML tree, the evolutionary relationship is closer to viruses found in the Psittacini.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3

Similar content being viewed by others

References

  1. Duffy S, Shackelton LA, Holmes EC (2008) Rates of evolutionary change in viruses: patterns and determinants. Nat Rev Genet 9:267–276

    Article  CAS  PubMed  Google Scholar 

  2. Fauquet CM, Briddon RW, Brown JK, Moriones E, Stanley J, Zerbini M, Zhou X (2008) Geminivirus strain demarcation and nomenclature. Arch Virol 153:783–821

    Article  CAS  PubMed  Google Scholar 

  3. Firth C, Charleston MA, Duffy S, Shapiro B, Holmes EC (2009) Insights into the evolutionary history of an emerging livestock pathogen: porcine circovirus 2. J Virol 83:12813–12821

    Article  CAS  PubMed  Google Scholar 

  4. Gerlach H (1994) Circoviridae-psittacine beak and feather disease virus. In: Ritchie BW, Harrison GT, Harrison LR (eds) Avian medicine: principles and practice. Wingers Publishing Incorporation, Lake Worth, FL, pp 894–903

    Google Scholar 

  5. Guindon S, Gascuel O (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52:696–704

    Article  PubMed  Google Scholar 

  6. Ha HJ, Anderson IL, Alley MR, Springett BP, Gartrell BD (2007) The prevalence of beak and feather disease virus infection in wild populations of parrots and cockatoos in New Zealand. New Zeal Vet J 55:235–238

    CAS  Google Scholar 

  7. Hale KA, Briskie JV (2007) Decreased immunocompetence in a severely bottlenecked population of an endemic New Zealand bird. Anim Conserv 10:2–10

    Article  Google Scholar 

  8. Heath L, Martin DP, Warburton L, Perrin M, Horsfield W, Kingsley C, Rybicki EP, Williamson AL (2004) Evidence of unique genotypes of beak and feather disease virus in southern Africa. J Virol 78:9277–9284

    Article  CAS  PubMed  Google Scholar 

  9. Heath L, Williamson AL, Rybicki EP (2006) The capsid protein of beak and feather disease virus binds to the viral DNA and is responsible for transporting the replication-associated protein into the nucleus. J Virol 80:7219–7225

    Article  CAS  PubMed  Google Scholar 

  10. Kock ND, Hangartnar PU, Lucke V (1993) Variation in clinical disease and species susceptibility to psittacine beak and feather disease in Zimbabwean lovebirds. Onderstepoort J Vet Res 60:159–161

    CAS  PubMed  Google Scholar 

  11. Lefeuvre P, Lett JM, Varsani A, Martin DP (2009) Widely conserved recombination patterns among single-stranded DNA viruses. J Virol 83:2697–2707

    Article  CAS  PubMed  Google Scholar 

  12. Martin DP, Williamson C, Posada D (2005) RDP2: recombination detection and analysis from sequence alignments. Bioinformatics 21:260–262

    Article  CAS  PubMed  Google Scholar 

  13. Meehan BM, Creelan JL, McNulty MS, Todd D (1997) Sequence of porcine circovirus DNA: affinities with plant circoviruses. J Gen Virol 78:221–227

    CAS  PubMed  Google Scholar 

  14. Niagro FD, Forsthoefel AN, Lawther RP, Kamalanathan L, Ritchie BW, Latimer KS, Lukert PD (1998) Beak and feather disease virus and porcine circovirus genomes: intermediates between the geminiviruses and plant circoviruses. Arch Virol 143:1723–1744

    Article  CAS  PubMed  Google Scholar 

  15. Ortiz-Catedral L, McInnes K, Hauber ME, Brunton DH (2009) First report of psittacine beak and feather disease (PBFD) in wild red-crowned parakeets (Cyanoramphus novaezelandiae) in New Zealand. Emu 109:244–247

    Article  Google Scholar 

  16. Pass DA, Perry RA (1984) The pathology of psittacine beak and feather disease. Aust Vet J 61:69–74

    Article  CAS  PubMed  Google Scholar 

  17. Perrin M, Downs C, Symes C (1999) Final blows for the cape parrot? PsittaScene 11:12–13

    Google Scholar 

  18. Posada D (2006) ModelTest Server: a web-based tool for the statistical selection of models of nucleotide substitution online. Nucleic Acids Res 34:W700–W703

    Article  CAS  PubMed  Google Scholar 

  19. Raidal S, McElnea CL, Cross GM (2008) Seroprevalence of psittacine beak and feather disease in wild psittacine birds in New South Wales. Aust Vet J 70:137–139

    Article  Google Scholar 

  20. Ritchie BW, Niagro FD, Lukert PD, Steffens WL, Latimer KS (1989) Characterization of a new virus from cockatoos with psittacine beak and feather disease. Virology 171:83–88

    Article  CAS  PubMed  Google Scholar 

  21. Ritchie PA, Anderson IL, Lambert DM (2003) Evidence for specificity of psittacine beak and feather disease viruses among avian hosts. Virology 306:109–115

    Article  CAS  PubMed  Google Scholar 

  22. Seutin G, White BN, Boag PT (1991) Preservation of avian blood and tissue samples for DNA analyses. Can J Zool—Rev Can Zool 69:82–90

    Article  CAS  Google Scholar 

  23. Shepherd DN, Martin DP, Lefeuvre P, Monjane AL, Owor BE, Rybicki EP, Varsani A (2008) A protocol for the rapid isolation of full geminivirus genomes from dried plant tissue. J Virol Methods 149:97–102

    Article  CAS  PubMed  Google Scholar 

  24. Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. Mol Biol Evol 24:1596–1599

    Article  CAS  PubMed  Google Scholar 

  25. Thompson JD, Higgins DG, Gibson TJ (1994) Clustal-W—improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673–4680

    Article  CAS  PubMed  Google Scholar 

  26. Todd D (2000) Circoviruses: immunosuppressive threats to avian species: a review. Avian Pathol 29:373–394

    Article  CAS  PubMed  Google Scholar 

  27. Tompkins DM, Mitchell RA, Bryant DM (2006) Hybridization increases measures of innate and cell-mediated immunity in an endangered bird species. J Anim Ecol 75:559–564

    Article  PubMed  Google Scholar 

  28. Vega-Rocha S, Gronenborn B, Gronenborn AM, Campos-Olivas R (2007) Solution structure of the endonuclease domain from the master replication initiator protein of the nanovirus faba bean necrotic yellows virus and comparison with the corresponding geminivirus and circovirus structures. Biochemistry (US) 46:6201–6212

    Article  CAS  Google Scholar 

Download references

Acknowledgments

This research was completed with the logistical and financial support of the University of Canterbury (Science Faculty Early Career Grant), New Zealand Department of Conservation, Massey University (Institute of Natural Sciences), the University of Auckland (School of Biological Sciences), Motuihe Island Trust, Tawharanui Open Sanctuary Supporters Inc., Auckland Regional Council, and National Council of Science from Mexico (CONACYT). This research was conducted under full approval of the New Zealand Department of Conservation (permits AK-15300-RES, AK-20666-FAU and AK-22857-FAU) and Massey University Animal Ethics Committee (protocols MUAEC 07/138 and 08/24). MM is supported by the New Zealand Foundation for Research, Science and Technology (UOCX0601). We thank the numerous volunteers who assisted with capture and processing of red-fronted of parakeets on Little Barrier Island. Special thanks go to Shane McInnes and Liz Whitwell (Department of Conservation) who greatly facilitated our work on Little Barrier Island.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Arvind Varsani.

Electronic supplementary material

Rights and permissions

Reprints and permissions

About this article

Cite this article

Ortiz-Catedral, L., Kurenbach, B., Massaro, M. et al. A new isolate of beak and feather disease virus from endemic wild red-fronted parakeets (Cyanoramphus novaezelandiae) in New Zealand. Arch Virol 155, 613–620 (2010). https://doi.org/10.1007/s00705-010-0607-2

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00705-010-0607-2

Keywords

Navigation