Skip to main content
Log in

Isolation of Three Xylanase-Producing Strains of Actinomycetes and Their Identification Using Molecular Methods

  • Published:
Current Microbiology Aims and scope Submit manuscript

Abstract

Eighty-eight actinomycetes were isolated from 20 samples collected from different locations in and around Delhi, India. Among these, 69 isolates were found positive for xylanase production. Of 69 isolates, 3 (SN32, SN77, and SN83) produced >125 IU/ml xylanase. Modern genetic tools were used for revealing the identities of these potent xylanase producers. The selected isolates were categorized under the genus Streptomyces based on their cultural and morphologic characteristics. Genetic diversity among these species of Streptomyces was established based on restriction length fragment polymorphism and random amplified polymorphic DNA analysis. The closest phylogenetic neighbours according to the 16S rRNA gene-sequence data for the three isolates SN32, SN77, and SN83 were Streptomyces cyaneus, S. tendae, and S. caelestis, respectively.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Fig. 1
Fig. 2
Fig. 3

Similar content being viewed by others

Literature Cited

  1. Bull TA, Goodfellow M, Slater JH (1992) Biodiversity as a source of innovation in biotechnology. Ann Rev Microbiol 46:219–252

    Article  CAS  Google Scholar 

  2. Christov LP, Szakaces G, Balakrishnan H (1999) Production, partial characterization and use of fungal cellulose free xylanases in pulp bleaching. Process Biochem 34:511–517

    Article  CAS  Google Scholar 

  3. Cuppuccino JG, Sherman N (1996) Microbiology: A laboratory manual, 4th edn. Benjamin/Cummings, New York, NY

    Google Scholar 

  4. Goodfellow M (1989) Suprageneric classification of actinomycetes. In: Williams ST, Sharpe ME, Holt JG (eds) Bergey’s manual of systematic bacteriology, vol. 4th. Baltimore, MD: Williams and Wilkins, pp 2333–2339

    Google Scholar 

  5. Gupta S, Bhushan B, Hoondal GS (2000) Isolation, purification, and characterization of xylanase from Staphylococcus sp. SG-13 and its application in biobleaching of kraft pulp. J Appl Microbiol 88:325–334

    Article  PubMed  CAS  Google Scholar 

  6. Ikura Y, Horikoshi K (1987) Stimulatory effect of certain amino acids on xylanase production by alkalophillic Bacillus sp. Agric Biol Chem 51:3143–3145

    CAS  Google Scholar 

  7. Kansoh AL, Nagieb ZA (2004) Xylanase and mannanase enzymes from Streptomyces galbus NR and their use in biobleaching of softwood kraft pulp. Antonie Van Leeuwenhoek 85:103–114

    Article  PubMed  CAS  Google Scholar 

  8. Kieser T, Bibb MJ, Buttner MJ, Charter KF, Hopwood DA (2000) Practical Streptomyces Genetics. John Innes Foundation Crowes, Norwick, England

    Google Scholar 

  9. Logan NA (1994) Bacterial systematic, 1st edn. Blackwell Scientific, Oxford, England

    Google Scholar 

  10. Lu JJ, Perng CL, Lee SV, Wan CC (2000) Use of PCR with universal primers and restriction endonuclease digestions for detection and identification of common bacterial pathogens in cerebrospinal fluid. J Clin Microbiol 38:2076–2080

    PubMed  CAS  Google Scholar 

  11. Mansour FA, Shereif AA, Nour el-Dein MM, Abou-Dobara MI, Ball AS (2003) Purification and characterization of xylanase from a thermophilic Streptomyces sp. K37. Acta Microbiol Pol 52:159–172

    PubMed  CAS  Google Scholar 

  12. McCarthy AJ (1987) Lignocellulose degradation by actinomycetes. FEMS Microbiol Rev 46:145–163

    Article  CAS  Google Scholar 

  13. Miller GL (1959) Use of dinitrosalicylic acid reagent for determination of reducing sugar. Anal Chem 31:426–428

    Article  CAS  Google Scholar 

  14. Nakamura S, Nakai R, Wakabayashi K, Nakai R, Aono R, Horikoshi K (1993) Production of alkaline xylanase by a newly isolated alkalophillic Bacillus sp. strain 41M-1. World Journal of Microbiology and Biotechnology 9:221–224

    Article  CAS  Google Scholar 

  15. Nicklin J, Graeme-Cook K, Paget T, Killington R (1999) Instant notes in microbiology. In: Hames BD (ed). Oxford, England: BIOS Scientific

  16. Nielan BA (1995) Identification and phylogenetic analysis of toxigenic cyanobacteria by multiplex randomly amplified polymorphic DNA PCR. Appl Environ Microbiol 61:2286–2291

    Google Scholar 

  17. Ninawe S, Kuhad RC (2005) Use of xylan-rich cost effective agro-residues in the production of xylanase by Streptomyces cyaneus SN32. J Appl Microbiol 99:1141–1148

    Article  PubMed  CAS  Google Scholar 

  18. Rawashdeh R, Saadoun I, Mahasneh A (2005) Effect of cultural conditions on xylanase production by Streptomyces sp. (strain Ib 24D) and its potential to utilize tomato pomace. Afr J Biotechnol 4:251–255

    CAS  Google Scholar 

  19. Reddy GSN, Aggarwal RK, Matsumoto GI, Shivaji S (2000) Arthrobactor flavus sp. nov., a psychrophilic bacterium isolated from a pond in McMurdo Dry Valley, Antarctica. Int J Syst Evol Microbiol 50: 1553–1561

    PubMed  CAS  Google Scholar 

  20. Tassanakjon A, Pongsomboon S, Rimphanitchayakit V (1997) Random amplified polymorphic DNA (RAPD) markers for determination of genetic variation in wild populations of the black tiger prawn (Penaeus monodon) in Thailand. Mole Marine Biol Biotechnol 6:110–115

    Google Scholar 

  21. Teater RM, Wood PJ (1982) Use of Congo red-polysaccharide interations in enumeration and characterization of cellulolytic bacteria from the bovine rumen. Appl Environ Microbiol 43:777–780

    Google Scholar 

Download references

Acknowledgments

The corresponding investigator thankfully acknowledges the study leave granted by Department of Biotechnology, Ministry of Science and Technology, Government of India, New Delhi to undertake this work.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Suchita Ninawe.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Ninawe, S., Lal, R. & Kuhad, R.C. Isolation of Three Xylanase-Producing Strains of Actinomycetes and Their Identification Using Molecular Methods. Curr Microbiol 53, 178–182 (2006). https://doi.org/10.1007/s00284-005-0285-6

Download citation

  • Received:

  • Accepted:

  • Published:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00284-005-0285-6

Keywords

Navigation