Skip to main content
Log in

Do Avian Mitochondria Recombine?

  • Published:
Journal of Molecular Evolution Aims and scope Submit manuscript

Abstract

The dogma of strict maternal inheritance of mitochondria is now being tested with population genetics methods on sequence data from many species. In this study we investigated whether recombination occurs in the mitochondria of the blue tit (Parus caeruleus) by studying polymorphisms in the mitochondrial control region and in a recently identified (A) n microsatellite on the W chromosome. The female heterogamety of avian sex chromosomes allows a test of whether mitochondrial recombination affects genealogical inference by comparison of mitochondrial and W-linked sequence variation. There is no discrepancy between mitochondrial and W-linked genealogies in blue tits, consistent with no recombination. We also analyzed mitochondrial sequence variation in both blue tits and peregrine falcons (Falco peregrinus) using a coalescent-based approach which accounts for recurrent mutation; in neither bird species did we find evidence of recombination. We conclude that it is unlikely that mitochondrial recombination has large effects on mitochondrial genetic variability in birds.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Figure 1

Similar content being viewed by others

References

  1. P Awadalla A Eyre-Walker J Maynard Smith (1999) ArticleTitleLinkage disequilibrium and recombination in hominid mitochondrial DNA. Science 286 2524 Occurrence Handle10.1126/science.286.5449.2524 Occurrence Handle1:CAS:528:DC%2BD3cXntlCi Occurrence Handle10617471

    Article  CAS  PubMed  Google Scholar 

  2. S Bensch T Price J Kohn (1997) ArticleTitleIsolation and characterization of microsatellite loci in a Phylloscopus warbler. Mol Ecol 6 91–92 Occurrence Handle10.1046/j.1365-294X.1997.00150.x Occurrence Handle1:CAS:528:DyaK2sXnsVCrsw%3D%3D Occurrence Handle9004521

    Article  CAS  PubMed  Google Scholar 

  3. S Berlin H Ellegren (2001) ArticleTitleClonal inheritance of avian mitochondrial DNA. Nature 413 37–38 Occurrence Handle10.1038/35092623 Occurrence Handle1:CAS:528:DC%2BD3MXmvFSmurY%3D Occurrence Handle11544517

    Article  CAS  PubMed  Google Scholar 

  4. M Clement D Posada KA Crandall (2000) ArticleTitleTCS: A computer program to estimate gene genealogies. Mol Ecol 9 1657–1659 Occurrence Handle1:CAS:528:DC%2BD3cXnvV2gtbw%3D Occurrence Handle11050560

    CAS  PubMed  Google Scholar 

  5. DA Dawson O Hanotte C Greig IRK Stewart T Burke (2000) ArticleTitlePolymorphic microsatellites in the blue tit Parus caeruleus and their cross-species utility in 20 songbird families. Mol Ecol 9 1941–1944 Occurrence Handle10.1046/j.1365-294x.2000.01094-14.x Occurrence Handle1:CAS:528:DC%2BD3cXos1ymurs%3D Occurrence Handle11091342

    Article  CAS  PubMed  Google Scholar 

  6. H Ellegren (2000) ArticleTitleEvolution of the avian sex chromosomes and their role in sex determination. Trends Ecol Evol 15 188–192 Occurrence Handle10.1016/S0169-5347(00)01821-8 Occurrence Handle10782132

    Article  PubMed  Google Scholar 

  7. A Eyre-Walker P Awadalla (2001) ArticleTitleDoes human mtDNA recombine? J Mol Evol 53 430–435 Occurrence Handle10.1007/s002390010232 Occurrence Handle1:CAS:528:DC%2BD3MXotVahsr8%3D Occurrence Handle11675602

    Article  CAS  PubMed  Google Scholar 

  8. A Eyre-Walker NH Smith J Maynard Smith (1999) ArticleTitleHow clonal are human mitochondria? Proc R Soc Lond B 266 477 Occurrence Handle1:STN:280:DyaK1M3gsFOjuw%3D%3D Occurrence Handle10189711

    CAS  PubMed  Google Scholar 

  9. RR Hudson NL Kaplan (1985) ArticleTitleStatistical properties in the number of recombination events in the history of a sample of DNA sequences. Genetics 111 147–164 Occurrence Handle1:STN:280:BiqB1cnjtVw%3D Occurrence Handle4029609

    CAS  PubMed  Google Scholar 

  10. H Innan M Nordborg (2002) ArticleTitleRecombination or mutational hot spots in human mtDNA? Mol Biol Evol 19 1122–1127 Occurrence Handle1:CAS:528:DC%2BD38Xlt1akt7k%3D Occurrence Handle12082131

    CAS  PubMed  Google Scholar 

  11. J Klicka RM Zink (1997) ArticleTitleThe importance of recent ice ages in speciation: A failed paradigm. Science 277 1666–1669 Occurrence Handle10.1126/science.277.5332.1666 Occurrence Handle1:CAS:528:DyaK2sXmtVSgurk%3D

    Article  CAS  Google Scholar 

  12. S Kumar K Tamura IB Jakobsen M Nei (2001) ArticleTitleMEGA2; Molecular evolutionary genetics analysis software. Bioinformatics 17 1244–1245 Occurrence Handle1:CAS:528:DC%2BD38XmtVCktQ%3D%3D Occurrence Handle11751241

    CAS  PubMed  Google Scholar 

  13. L Kvist M Ruokonen J Lumme M Orell (1999) ArticleTitleDifferent population structures in northern and southern populations of the European blue tit. J Evol Biol 12 798–805 Occurrence Handle10.1046/j.1420-9101.1999.00098.x

    Article  Google Scholar 

  14. J Maynard Smith (1999) ArticleTitleThe detection and measurement of recombination from sequence data. Genetics 153 1021–1027 Occurrence Handle10511575

    PubMed  Google Scholar 

  15. GAT McVean (2001) ArticleTitleWhat do patterns of genetic variability reveal about mitochondrial recombination? Heredity 87 613–620 Occurrence Handle10.1046/j.1365-2540.2001.00965.x Occurrence Handle1:STN:280:DC%2BD387ntVWhuw%3D%3D Occurrence Handle11903556

    Article  CAS  PubMed  Google Scholar 

  16. G McVean P Awadalla P Fearnhead (2002) ArticleTitleA coalescent-based method for detecting and estimating recombination from gene sequences. Genetics 160 1231–1241 Occurrence Handle1:CAS:528:DC%2BD38XjtFSitrg%3D Occurrence Handle11901136

    CAS  PubMed  Google Scholar 

  17. H Montell AK Fridolfsson H Ellegren (2001) ArticleTitleContrasting levels of nucleotide diversity on the avian Z and W sex chromosomes. Mol Biol Evol 18 2010–2016 Occurrence Handle1:CAS:528:DC%2BD3MXotVSlsb4%3D Occurrence Handle11606697

    CAS  PubMed  Google Scholar 

  18. D Posada KA Crandall (2001) ArticleTitleEvaluation of methods for detecting recombination from DNA sequences: Computer simulations. Proc Natl Acad Sci USA 98 13757–13762 Occurrence Handle10.1073/pnas.241370698 Occurrence Handle1:CAS:528:DC%2BD3MXovVyntrc%3D Occurrence Handle11717435

    Article  CAS  PubMed  Google Scholar 

  19. D Posada KA Crandall (2002) ArticleTitleThe effect of recombination on the accuracy of phylogeny estimation. J Mol Evol 54 396–402 Occurrence Handle1:CAS:528:DC%2BD38XhsFKks78%3D Occurrence Handle11847565

    CAS  PubMed  Google Scholar 

  20. J Rozas R Rozas (1999) ArticleTitleDnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15 174–175 Occurrence Handle10.1093/bioinformatics/15.2.174 Occurrence Handle1:CAS:528:DyaK1MXisVOksrY%3D Occurrence Handle10089204

    Article  CAS  PubMed  Google Scholar 

  21. M Ruokonen L Kvist (2002) ArticleTitleStructure and evolution of the avian mitochondrial control region. Mol Phylogenet Evol 23 422–432 Occurrence Handle10.1016/S1055-7903(02)00021-0 Occurrence Handle1:CAS:528:DC%2BD38XltVKrtrc%3D Occurrence Handle12099796

    Article  CAS  PubMed  Google Scholar 

  22. K Tamura M Nei (1993) ArticleTitleEstimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol 10 512–526 Occurrence Handle1:CAS:528:DyaK3sXks1CksL4%3D Occurrence Handle8336541

    CAS  PubMed  Google Scholar 

  23. C Wiuf (2001) ArticleTitleRecombination in human mitochondrial DNA? Genetics 159 749–756 Occurrence Handle1:CAS:528:DC%2BD3MXot1SrsLw%3D Occurrence Handle11606549

    CAS  PubMed  Google Scholar 

Download references

Acknowledgements

Thanks go to Dr. Simon Griffith, who provided blood samples from Gotland and Oxford blue tits, Dr. Katharina Foerster, who provided DNA from Austrian blue tits, and Hannah Sundström, who first identified the PcaW microsatellite used in this study. H.E. is a Royal Swedish Academy of Sciences Research Fellow supported by a grant from the Knut and Alice Wallenberg Foundation. This study was supported by the Swedish Research Council.

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Sofia Berlin.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Berlin, S., Smith, N.G. & Ellegren, H. Do Avian Mitochondria Recombine? . J Mol Evol 58, 163–167 (2004). https://doi.org/10.1007/s00239-003-2537-z

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/s00239-003-2537-z

Keywords

Navigation