Skip to main content
Log in

Conservation of human Y chromosome sequences among male great apes: Implications for the evolution of Y chromosomes

  • Published:
Journal of Molecular Evolution Aims and scope Submit manuscript

Abstract

Nine newly described single-copy and lowcopy-number genomic DNA sequences isolated from a flow-sorted human Y chromosome library were mapped to regions of the human Y chromosome and were hybridized to Southern blots of male and female great ape genomic DNAs (Gorilla gorilla, Pan troglodytes, Pongo pygmaeus). Eight of the nine sequences mapped to the euchromatic Y long arm (Yq) in humans, and the ninth mapped to the short arm or pericentromeric region. All nine of the newly identified sequences and two additional human Yq sequences hybridized to restriction fragments in male but not female genomic DNA from the great apes, indicating Y chromosome localization. Seven of these 11 human Yq sequences hybridized to similarly-sized restriction endonuclease fragments in all the great ape species analyzed. The five human sequences that mapped to the most distal subregion of Yq (deletion of which region is associated with spermatogenic failure in humans) were hybridized to Southern blots generated by pulsed-field gel electrophoresis. These sequences define a region of approximately 1 Mb on human Yq in which HpaII tiny fragment (HTF) islands appear to be absent. The conservation of these human Yq sequences on great ape Y chromosomes indicates a greater stability in this region of the Y than has been previously described for most anonymous human Y chromosomal sequences. The stability of these sequences on great ape Y chromosomes seems remarkable given that this region of the Y does not undergo meiotic recombination and the sequences do not appear to encode genes for which positive selection might occur.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Affara N, Florentin L, Morrison N, Kwok K, Mitchell M, Cook A, Jamieson D, Glasgow L, Meredith L, Boyd E, Ferguson-Smith M (1986) Regional assignment of Y-linked DNA probes by deletion mapping and their homology with X-chromosome and autosomal sequences. Nucleic Acids Res 14:5353–5373

    Google Scholar 

  • Bardom B, Zuffardi O, Guioli S, Ballabio A, Simi P, Cavalli P, Grimoldi M, Fraccaro M, Camerino G (1991) A deletion map of the human Yq11 region: implications for the evolution of the Y chromosome and tentative mapping of a locus involving spermatogenesis. Genomics 11:443–451

    Google Scholar 

  • Barlow D, Lehrach H (1987) Genetics by gel electrophoresis: the impact of pulsed field gel electrophoresis on mammalian genetics. Trends Genet 3:157–171

    Google Scholar 

  • Bickmore W, Cooke H (1987) Evolution of homologous sequences on the human X and Y chromosomes, outside of the meiotic pairing segment. Nucleic Acids Res 15:6261–6271

    Google Scholar 

  • Bishop C, Guellaen G, Geldwerth D, Voss R, Fellous M, Weissenbach J (1983) Single-copy DNA sequences for the human Y chromosome. Nature 303:831–832

    Google Scholar 

  • Brown WRA, Bird A (1986) Long-range restriction site mapping of mammalian genomic DNA. Nature 322:477–481

    Google Scholar 

  • Burk R, Ma P, Smith K (1985) Characterization and evolution of a single-copy sequence from the human Y chromosome. Mol Cell Biol 5:576–581

    Google Scholar 

  • Casanova M, Leroy P, Boucekkine C, Weissenbach J, Bishop C, Fellous M, Purrello M, Fiori G, Siniscalco M (1985) A human Y-linked DNA polymorphism and its potential for estimating genetic and evolutionary distance. Science 230:1403–1406

    Google Scholar 

  • Charlesworth B (1978) Model for evolution of Y chromosomes and dosage compensation. Proc Natl Acad Sci USA 75:5618–5622

    Google Scholar 

  • Clark A (1988) The evolution of the Y chromosome with X-Y recombination. Genetics 119:711–720

    Google Scholar 

  • Cooke H (1976) Repeated sequence specific to human males. Nature 262:182–186

    Google Scholar 

  • Cooke H, Schmidtke J, Gosden J (1982) Characterization of a human Y chromosome repeated sequence and related sequences in higher primates. Chromosoma 87:491–502

    Google Scholar 

  • Cooke H, Fames J, Green D (1983) Structure and evolution of human Y chromosome DNA. Differentiation 23:S48-S55

    Google Scholar 

  • Erickson R (1987) Evolution of four human Y chromosomal unique sequences. J Mol Evol 25:300–307

    Google Scholar 

  • Graves JAM (1991) Mammalian genome evolution: new clues from comparisons of eutherians, marsupials and monotremes. Comp Biochem Physiol 99A:5–11

    Google Scholar 

  • Jakubiczka S, Arnemann J, Cooke H, Krawczak M, Schmidtke J (1989) A search for restriction fragment length polymorphism on the human Y chromosome. Hum Genet 84:86–88

    Google Scholar 

  • Koenig M, Camerino G, Heilig R, Mandel J-L (1984) A DNA fragment from the human X chromosome short arm which detects a partially homologous sequence on the Y chromosome long arm. Nucleic Acids Res 12:4097–4109

    Google Scholar 

  • Koenig M, Moisan J, Heilig R, Mandel J-L (1985) Homologies between X and Y chromosomes detected by DNA probes: localisation and evolution. Nucleic Acids Res 13:5485–5501

    Google Scholar 

  • Kunkel L, Smith K (1982) Evolution of human Y-chromosome DNA. Chromosoma 86:209–228

    Google Scholar 

  • Li WH, Grauer D (1991) Fundamental of molecular evolution. Sinauer Associates, Sunderland, MA

    Google Scholar 

  • Lindsay S, Bird A (1987) Use of restriction enzymes to detect potential gene sequences in mammalian DNA. Nature 327:336–338

    Article  Google Scholar 

  • Lucotte G, Ngo N (1985) p49f, a highly polymorphic probe, that detects Taql RFLPs on the human Y chromosome. Nucleic Acids Res 13:8285

    Google Scholar 

  • Ma K, Sharkey A, Kirsch S, Vogt P, Keil R, Hargreave T, McBeath S, Chandley A (1992) Towards the molecular localisation of the AZF locus: mapping of microdeletions in azoospermic men within 14 subintervals of interval 6 of the human Y chromosome. Hum Mol Genet 1:29–33

    Google Scholar 

  • Ngo K, Vergnaud G, Johnsson C, Lucotte G, Weissenbach J (1986) A DNA probe detecting multiple haplotypes of the human Y chromosome. Am J Hum Genet 38:407–418

    Google Scholar 

  • Page D, De Martinville B, Barker D, Wyman A, White R, Franke U, Botstein D (1982) Single-copy sequence hybridizes to polymorphic and homologous loci on human X and Y chromosomes. Proc Natl Acad Sci USA 79:5352–5356

    Google Scholar 

  • Page D, Harper M, Love J, Botstein D (1984) Occurrence of a transposition from the X-chromosome long arm to the Y-chromosome short arm during human evolution. Nature 311:119–123

    Google Scholar 

  • Pritchard C, Goodfellow PJ, Goodfellow PN (1987) Mapping the limits of the human pseudoautosomal region and a candidate sequence of the male-determining gene. Nature 328:273–275

    Google Scholar 

  • Rice W (1987) Genetic hitchhiking and the evolution of reduced genetic activity of the Y sex chromosome. Genetics 116:161–167

    Google Scholar 

  • Sirota L, Zlotogora Y, Shabtai F, Halbrecht I, Elian E (1981) 49,XYYYY. A case report. Clin Genet 19:87–93

    Google Scholar 

  • Vollrath D, Foote S, Hilton A, Brown LG, Beer-Romero P, Bogan J, Page D (1992) The human Y chromosome: a 43-interval map based on naturally occurring deletions. Science 258:52–59

    Google Scholar 

  • Whisenant E, Rasheed B, Ostrer H, Bhatnagar Y (1991) Evolution and sequence analysis of a human Y-chromosomal DNA fragment. J Mol Evol 33:133–141

    Google Scholar 

  • Wolfe J, Erickson R, Rigby P, Goodfellow PN (1983) Regional localization of 3 Y-derived sequences on the human X and Y chromosomes. Ann Hum Genet 48:253–259

    Google Scholar 

  • Yunis J, Prakash O (1982) The origin of man: a chromosomal pictorial legacy. Science 215:1525–1529

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

Correspondence to: B. Steele Allen

Rights and permissions

Reprints and permissions

About this article

Cite this article

Allen, B.S., Ostrer, H. Conservation of human Y chromosome sequences among male great apes: Implications for the evolution of Y chromosomes. J Mol Evol 39, 13–21 (1994). https://doi.org/10.1007/BF00178245

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00178245

Key words

Navigation