Skip to main content
Log in

Physical mapping of a family of interferon-activated genes, serum amyloid P-component, and α-spectrin on mouse chromosome 1

  • Published:
Immunogenetics Aims and scope Submit manuscript

Abstract

This report defines genetic and physical relationships among α-spectrin (Spna-1), serum amyloid P-component (Sap), and a family of interferon-activated genes, provisionally designatedIfi202, Ifi203, andIfi204. By linkage analysis using a large panel of interspecific backcross mice,Sap, Ifi202, andIfi204 were shown to be tightly linked toSpna-1 on distal mouse chromosome 1. By pulsed field electrophoresis, a genomic restriction map of 6400 kb of distal mouse chromosome 1 was generated, linking genes encodingSap, (Ifi202, Ifi203, Ifi204), andSpna-1 in that order within 450–1000 kb (where the genes within brackets were not ordered). The interferon-activated genesIfi202, Ifi203, andIfi204 were linked within 75–150 kb. Furthermore, genes transcriptionally activated by cytokines, namelySap, Ifi202, Ifi203, andIfi204, were located within 450 kb. These studies suggest the possibility that selective pressure may maintain in physical proximity gene clusters which are under coordinate transcriptional control.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Amaldi, I., Reith, W., Berte, C., and Mach, B.: Induction of HLA class II genes by IFN-τ is transcriptional and requires a trans-acting protein.J Immunol 142: 999–1004, 1989

    CAS  PubMed  Google Scholar 

  • Dale, T. C., Imam, A. M. A., Kerr, I. M., and Stark, G. R.: Rapid activation by interferon α of a latent DNA-binding protein present in the cytoplasm of untreated cells.Proc Natl Acad Sci USA 86: 1203–1207, 1989

    CAS  PubMed  Google Scholar 

  • Dracopoli, N. C., Rose, E., Whitfield, G. K., Guidon, P. T., Bale, S. J., Chance, P. A., Kourides, I. A., and Housman, D. E.: Two thyroid regulated genes, the β-subunits of nerve growth factor (NGFB) and thyroid stimulating hormone (TSHB), are located less than 310 kb apart in both human and mouse genomes.Genomics 3: 161–167, 1988

    Article  CAS  PubMed  Google Scholar 

  • Engel, D. A., Samanta, H., Brawner, M. E., and Lengyel, P.: Interferon action: transcriptional control of a gene specifying a 56,000-Da protein in Ehrlich ascites tumor cells.Virology 142: 389–397, 1985

    Article  CAS  PubMed  Google Scholar 

  • Engel, D. A., Snoddy, J., Toniato, E., and Lengyel, P.: Interferons as gene activators: close linkage of two interferon-activatable murine genes.Virology 166: 24–29, 1988

    Article  CAS  PubMed  Google Scholar 

  • Gribaudo, G., Toniato, E., Engel, D. A., and Lengyel, P.: Interferons as gene activators: characteristics of an interferon-activatable enhancer.J Biol Chem 262: 11878–11883, 1987

    CAS  PubMed  Google Scholar 

  • Kingsmore, S. F., Vik, D. P., Kurtz, C. B., Leroy, P., Tack, B.-F., Weis, J. H., and Seldin, M. F.: Genetic organization of complement receptor related genes in the mouse.J Exp Med 169: 1479–1484, 1989

    Article  CAS  PubMed  Google Scholar 

  • Le, P. T. and Mortensen, R. F.: Induction and regulation by monokines of hepatic synthesis of mouse serum amyloid P-component (SAP).J Immunol 136: 2526–2533, 1986

    CAS  PubMed  Google Scholar 

  • Lindsay, S. and Bird, A. P.: Use of restriction enzymes to detect potential gene sequences in mammalian DNA.Nature 327: 336–339, 1987

    Article  CAS  PubMed  Google Scholar 

  • Lowell, C. A., Potter, D. A., Stearman, R. S., and Morrow, J. F.: Structure of the murine serum amyloid A gene family: gene conversion.J Biol Chem 261: 8442–8452, 1986a

    CAS  PubMed  Google Scholar 

  • Lowell, C. A., Stearman, R. S., and Morrow, J. F.: Transcriptional regulation of serum amyloid A gene expression.J Biol Chem 261: 8453–8461, 1986b

    CAS  PubMed  Google Scholar 

  • Mortensen, R. F., Le, P. T., and Taylor, B. A.: Mouse serum amyloid P-component (SAP) levels controlled by a locus on chromosome 1.Immunogenetics 22: 367–375, 1985

    Article  CAS  PubMed  Google Scholar 

  • Nadeau, J. H. and Taylor, B. A.: Lengths of chromosome segments conserved since divergence of man and mouse.Proc Natl Acad Sci USA 81: 814–818, 1984

    CAS  PubMed  Google Scholar 

  • Opdenakker, G., Snoddy, J., Choubey, D., Toniato, E., Pravtcheva, D. D., Seldin, M. F., Ruddle, F. H., and Lengyel, P.: Interferons as gene activators: a cluster of six interferon-activatable genes is linked to the erythroid alpha spectrin locus on murine chromosome 1.Virology, (in press), 1989

  • Pepys, M. B. and Baltz, L. M.: Acute phase proteins with special reference to C-reactive protein and related proteins (Pentaxins) and serum amyloid A protein.Adv Immunol 34: 141–212, 1983

    Article  CAS  PubMed  Google Scholar 

  • Pepys, M. B., Baltz, M., Gomer, K., Davies, A. J. S., and Doenhoff, M.: Serum amyloid P-component is an acute phase reactant in the mouse.Nature 278: 259–261, 1979

    Article  CAS  PubMed  Google Scholar 

  • Peska, S., Langer, J. A., Zoon, K. C., and Samuel, C. E.: Interferons and their actions.Annu Rev Biochem 56: 727–777, 1987

    Article  Google Scholar 

  • Rappold, G. A. and Lehrach, H.: A long range restriction map of the pseudoautosomal region by partial digest PFGE analysis from the telomere.Nucleic Acids Res 16: 5361–5377, 1988

    CAS  PubMed  Google Scholar 

  • Revel, M. and Chebath, J.: Interferon-activated genes.Trends Biochem Sci 11: 166–170, 1986

    Article  CAS  Google Scholar 

  • Samanta, H., Pravtcheva, D. D., Ruddle, F. H., and Lengyel, P.: Chromosomal location of mouse gene202 which is induced by interferons and specifies a 56.5 kD protein.J Interferon Res 4: 295–300, 1984

    CAS  PubMed  Google Scholar 

  • Samanta, H., Engel, D. A., Chao, H. M., Thakur, A., Garcia-Blanco, M. A., and Lengyel, P.: Interferons as gene activators: cloning of the 5′ terminus and the control segment of an interferon activated gene.J Biol Chem 261: 11849–11858, 1986

    CAS  PubMed  Google Scholar 

  • Seldin, M. F., Morse, H. C., D'Hoostelaere, L., Britten, J. L., and Steinberg, A. D.: Mapping of alpha-spectrin on distal mouse chromosome 1.Cytogenet Cell Genet 45: 52–54, 1987

    Article  CAS  PubMed  Google Scholar 

  • Seldin, M. F., Morse, H. C., Patton Reeves, J., Scribner, C. L., LeBoeuf, R. C., and Steinberg, A. D.: Genetic analysis of autoimmunegld mice. I. Identification of a restriction fragment length polymorphism closely linked to thegld mutation within a conserved linkage group.J Exp Med 167: 688–693, 1988a

    Article  CAS  PubMed  Google Scholar 

  • Seldin, M. F., Morse, H. C., LeBoeuf, R. C., and Steinberg, A. D.: Establishment of a molecular map of distal mouse chromosome 1: further definition of a conserved linkage group syntenic with human chromosome 1q.Genomics 2: 48–56, 1988b

    Article  CAS  PubMed  Google Scholar 

  • Serfling, E., Jasin, M., and Schaffner, W.: Enhancers and eukaryotic gene transcription.Trends Genet 1: 224–230, 1985

    Article  CAS  Google Scholar 

  • Wathelet, M. G., Spzirer, J., Nols, C. B., Clauss, I. M., De Wit, L., Islam, M. Q., Levan, G., Horisberger, M. A., Content, J., Spzirer, C., and Huez, G. A.: Cloning and chromosomal location of human genes inducible by type 1 interferon.Somat Cell Mol Genet 14: 415–426, 1988

    Article  CAS  PubMed  Google Scholar 

  • Whitehead, A. S., Rits, M., and Michaelson, J.: Molecular genetics of mouse serum amyloid P component (SAP): cloning and gene mapping.Immunogenetics 28: 388–390, 1988

    Article  CAS  PubMed  Google Scholar 

  • Winoto, A. and Baltimore, D.: A novel, inducible and T cell-specific enhancer located at the 3′ end of the T cell receptor α locus.EMBO J 8: 729–733, 1989

    CAS  PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Kingsmore, S.F., Snoddy, J., Choubey, D. et al. Physical mapping of a family of interferon-activated genes, serum amyloid P-component, and α-spectrin on mouse chromosome 1. Immunogenetics 30, 169–174 (1989). https://doi.org/10.1007/BF02421202

Download citation

  • Received:

  • Revised:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF02421202

Keywords

Navigation