Abstract
Gas liquid chromatography (GLC) and thin layer chromatography (TLC) analysis of cell wall content was used for identification of mycobacteria isolated in primary cultures. GLC permitted determination of the fatty acid and alcohol profiles ofMycobacterium simiae andMycobacterium marinum and detection of a peak inMycobacterium ulcerans formerly described forMycobacterium malmoense. Using the data obtained to fill some of the gaps in the dichotomic trees of Tisdall et al. and Jantzen et al., GLC analysis allowed full identification of 8 of 22 mycobacterial species after 24 hours. The other 14 species could be divided into four groups on the basis of similar findings on GLC. TLC was used for full identification of three species. The identification results of conventional methods were concordant with those of GLC and TLC in 161 of 169 strains (93 %) representing 21 different species. Using primarily chromatography for analysis of cell wall content, and in the case of some species complementary biochemical tests, the identification procedure could be shortened to a maximum of three days after primary culture.
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Daffé M, Lanéelle MA, Asselineau C, Lévy-Frébault V, David H: Intérêt taxonomique des acides gras des mycobactéries: proposition d'une méthode d'analyse. Annales de Microbiologie 1983, 134, Supplement B: 241–256.
Minnikin DE, Minnikin SM, Parlett JH, Goodfellow M, Magnusson M: Mycolic acid patterns of some species ofMycobacterium. Archives of Microbiology 1984, 231: 139–225.
Lévy-Frébault V, Goh KS, David HL: Mycolic acids analysis for clinical identification ofMycobacterium avium and related mycobacteria. Journal of Clinical Microbiology 1986, 24: 835–839.
Tisdall PA, Roberts GD, Anhalt JP: Identification of clinical isolates of mycobacteria with gas-liquid chromatography alone. Journal of Clinical Microbiology 1979, 10: 506–514.
Tisdall PA, Deyoung DR, Roberts GD, Anhalt JP: Identification of clinical isolates mycobacteria with gas-liquid chromatography: a 10 month follow-up study. Journal of Clinical Microbiology 1982, 16: 400–402.
Thoen CO, Karlson AG, Ellefson RD: Comparison by gas-liquid chromatography of the fatty acids ofMycobacterium avium and some other nonphotochromogenic mycobacteria. Applied Microbiology 1971, 22: 564–563.
Larsson L: Acidic methanolysis versus alkaline saponification in gas chromatography characterization of mycobacteria: differentiation betweenMycobacterium avium andMycobacterium gastri. Acta Pathological Microbiologica et Immunologica Scandinavica (Section B) 1983, 91: 235–239.
Portaels F, Larsson L, Jimenez J, Cierkens C: Biochemical characteristics and fatty acid composition of some armadillo-derived mycobacteria and their relation toMycobacterium gordonae. Journal of General Microbiology 1987, 133: 739–744.
Alvin C, Larsson L, Magnusson M, Mardh PA, Odham G, Westerdahl G: Determination of fatty acids and carbohydrate monomers in micro-organisms by means of glass capillary gas chromatography: analysis ofMycobacterium gordonae andMycobacterium scrofulaceum. Journal of General Microbiology 1983, 129: 401–405.
Julak J, Turecek F, Mikova Z: Identification of characteristic branched-chain fatty acids ofMycobacterium kansasii andgordonae by gas chromatography-mass spectrometry. Journal of Chromatography 1980, 190: 183–187.
Thoen CO, Karlson AG, Ellefson RD: Fatty acids ofMycobacterium kansasii, Applied Microbiology 1971, 21: 628–632.
Luquin M, Ausina V, Lopez Calahorra F, Belda F, Garcia Barcelo M, Celma C, Prats G: Evaluation of practical chromatographic procedures for identification of clinical isolates of mycobacteria. Journal of Clinical Microbiology 1991, 29: 120–130.
Luquin M, Lopez F, Ausina V: Capillary gas chromatographic analysis of mycolic acid cleavage products, cellular fatty acids and alcohols ofMycobacterium xenopi. Journal of Clinical Microbiology 1989, 27: 1403–1406.
Valero-Guillen P, Martin-Luengo F, Larsson L, Jimenez J, Juhlin I, Portaels F: Fatty and mycolic acids ofMycobacterium malmoense. Journal of Clinical Microbiology 1988, 26: 153–154.
Pouthier F, Parez JJ, Gerin V, Kayembe T, Dossogne JL: Mycobacterial characterization by gas-liquid chromatography. American Review of Respiratory Disease 1990, 141, Supplement 4/2: A 613.
Jantzen E, Tangen T, Eng J: Gas chromatography of mycobacterial fatty acids and alcohols. Diagnostic applications. Acta Pathologica Microbiologica et Immunologica Scandinavica 1989, 97: 1037–1045.
Collins CH, Grange JM, Yates MD: Organization and practice in tuberculosis bacteriology. Butterworth, London 1985, p. 125.
David H, Lévy-Frébault V, Thorel MF: Méthodes de laboratoire pour mycobactériologie clinique: commission des laboratoires de référence et d'expertise de l'Institut Pasteur. Institut Pasteur, Paris 1989, p. 40–41.
Larsson L, Jantzen E, Johnsson J: Gas chromatographic fatty acid profiles for characterization of mycobacteria: an interlaboratory methodological evaluation. European Journal of Clinical Microbiology 1985, 4: 483–487.
Odham G, Stenhagen E: Fatty acids. In: Waller GR (ed): Biochemical applications of mass spectrometry. Wiley-Interscience, New York, p. 213–214.
Heller SE, Milne GWA: Environmental Protection Agency and National Institute for Health Mass Spectral Data Base Volumes 1–4, Supplement 1, 1980 and Supplement 2, 1983. US Department of Commerce, Washington DC, 1978.
Lévy-Frébault V, Rafidinarivo E, Promé JC, Grandry J, Boisvert H, David HL:Mycobacterium fallax sp. nov. International Journal of Systematic Bacteriology 1983, 33: 336–343.
Miller LT: Single derivatization method for routine analysis of wholecell fatty acid methyl esters, including hydroxyacids. Journal of Clinical Microbiology 1982, 16: 584–586.
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Parez, J.J., Fauville-Dufaux, M., Dossogne, J.L. et al. Faster identification of mycobacteria using gas liquid and thin layer chromatography. Eur. J. Clin. Microbiol. Infect. Dis. 13, 717–725 (1994). https://doi.org/10.1007/BF02276054
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DOI: https://doi.org/10.1007/BF02276054