Skip to main content
Log in

Characterization of DNA sequences constituting the terminal heterochromatin of the chicken Z chromosome

  • Published:
Chromosome Research Aims and scope Submit manuscript

Abstract

Two clones, pCZTH5-8 and pCZTH12-8, were isolated from a female chicken genomic library by screening with sequences obtained from genomic libraries which had been constructed from a terminal region of a single Z chromosome of chicken utilizing laser microbeam irradiation and PCR amplification. Fluorescencein situ hybridization to the mitotic Z chromosome and the lampbrush ZW bivalent of chicken demonstrated that both the cloned sequences are located in the heterochromatic region of the Z chromosome at the end opposite to the pairing region with the W chromosome. The sequences pCZTH5-8 and pCZTH12-8 are distributed widely on both the telomeric bow-like loops (TBL) and the region I (short loops region) of the Z lampbrush chromosome. These clones, pCZTH12-8 particularly notably, hybridized also to the TBLs of lampbrush bivalents 1–4 of chicken. Both sequence are transcribed in the lampbrush stage oocytes on the Z chromosome and on other macrobivalents. The subfragment of pCZTH5-8 which hybridizes to the TBLs and the insert of pCZTH12-8 contain regions that are closely similar in sequence. The pCZTH5-8 sequence has no internal repeats and may be part of the 24-kb macrosatellite repeating unit that is evident afterNhel digestion of the genomic DNA. A cloned 24-kb unit, pFN-1, does not show significant DNA curvature, but cytosines of its CpG dinucleotides may be highly methylatedin vivo. This contrasts with the repeat sequences of the W heterochromatin which not only have highly methylated CpG but are also strongly curved. The 24-kb unit is repeated about 830 times in the diploid genome of a female chicken, suggesting that nearly the entire terminal heterochromatin on the Z chromosome consists of this macrosatellite family. Sequences of the greater part of the pCZTH5-8 are restricted to the genusGallus but the sequence of one subregion which hybridizes to TBLs is present in the genomes of the order Galliformes.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Institutional subscriptions

Similar content being viewed by others

References

  • Callan HG (1986)Lampbrush Chromosomes Berlin: Springer Verlag.

    Google Scholar 

  • Diaz MO, Gall JG (1985) Giant readthrough transcription units at the histone loci on lampbrush chromosomes of the newtNotophthalmus.Chromosoma 92: 243–253.

    Article  PubMed  Google Scholar 

  • Hadano S, Watanabe M, Yokoi H, et al. (1991) Laser microdissection and single unique primer PCR allow generation of regional chromosome DNA clones from a single human chromosome.Genomics 11: 364–373.

    PubMed  Google Scholar 

  • Kaelbling M, Fechheimer NS (1983) Synaptonemal complexes and the chromosome complement of domestic fowl,Gallus domesticus.Cytogenet Cell Genet 35: 87–92.

    PubMed  Google Scholar 

  • Kodama H, Saitoh H, Tone M, Kuhara S, Sakaki Y, Mizuno S (1987) Nucleotide sequences and unusual electrophoretic behavior of the W chromosome-specific repeating DNA units of the domestic fowl,Gallus gallus domesticus.Chromosoma 96: 18–25.

    Article  PubMed  Google Scholar 

  • Meinkoth J, Wahl G (1984) Hybridization of nucleic acids immobilized on solid supports.Anal Biochem 138: 267–284.

    Article  PubMed  Google Scholar 

  • Mizuno S, Tallman N, Cox RF (1978) Estrogen withdrawal in chick oviduct. Characterization of RNA synthesized in isolated nuclei using a mercurated precursor.Biochim Biophys Acta 520: 184–202.

    PubMed  Google Scholar 

  • Mizuno S, Saitoh Y, Nomura O, et al. (1993) Sex-specific DNA sequences in Galliformes and their application to the study of sex differentiation. In: Etches RJ, Gibbins AMV, eds.Manipulation of the Avian Genome. Boca Raton: CRC Press, pp 257–274.

    Google Scholar 

  • Rahn MI, Solari AJ (1986) Recombination nodules in the oocytes of chicken,Gallus domesticus.Cytogenet Cell Genet 43: 187–193.

    PubMed  Google Scholar 

  • Saitoh Y, Mizuno S (1992) Distribution ofXhoI andEcoRI family repetitive DNA sequences into separate domains in the chicken W chromosome.Chromosoma 101: 474–477.

    Article  PubMed  Google Scholar 

  • Saito I, Stark GR (1986) Charomids: Cosmid vectors for efficient cloning and mapping of large or small restriction fragments.Proc Natl Acad Sci USA 83: 8664–8668.

    PubMed  Google Scholar 

  • Saitoh H, Harata M, Mizuno S (1989) Presence of female-specific bent-repetitive DNA sequences in the genomes of turkey and pheasant and their interactions with W-protein of chicken.Chromosoma 98: 250–258.

    Article  PubMed  Google Scholar 

  • Saitoh Y, Saitoh H, Ohtomo K, Mizuno S (1991) Occupancy of the majority of DNA in the chicken W chromosome by bent-repetitive sequences.Chromosoma 101: 32–40.

    Article  PubMed  Google Scholar 

  • Saitoh Y, Ogawa A, Hori T, Kunita R, Mizuno S (1993) Identification and localization of two genes on the chicken Z chromosome: implication of evolutionary conservation of the Z chromosome among avian species.Chrom Res 1: 239–251.

    Article  PubMed  Google Scholar 

  • Schmid M, Olert J, Klett CH (1979) Chromosome banding in amphibia. III. Sex chromosomes inTriturus.Chromosoma 71: 29–55.

    Article  Google Scholar 

  • Sims S, Macgregor HC, Pellatt PS, Horner HA (1984) Chromosome 1 in crested and marbled newts (Triturus). An extraordinary case of heteromorphism and independent chromosome evolution.Chromosoma 89: 169–185.

    Article  Google Scholar 

  • Solari AJ (1977) Ultrastructure of the synaptic autosomes and the ZW bivalent in chicken oocytes.Chromosoma 64: 155–165.

    Article  Google Scholar 

  • Solari AJ, Dresser ME (1995) High-resolution cytological localization of theXhoI andEcoRI repeat sequences in the pachytene ZW bivalent of the chicken.Chrom Res 3: 87–93.

    Article  PubMed  Google Scholar 

  • Solovei I, Gaginskaya E, Hutchison, N, Macgregor H (1993) Avian sex chromosomes in the lampbrush form: ZW Lampbrush bivalents from six species of brid.Chrom Res 1: 153–166.

    Article  PubMed  Google Scholar 

  • Solovei I, Gaginskaya ER, Macgregor HC (1994) The arrangement and transcription of telomere DNA sequences at the ends of lampbrush chromosomes of birds.Chrom Res 2: 460–470.

    Article  PubMed  Google Scholar 

  • Suka N, Shinohara Y, Saitoh Y, et al. (1993) W-heterochromatin of chicken; its unusual DNA components, late replication, and chromatin structure.Genetica 88: 93–105.

    PubMed  Google Scholar 

  • Tone M, Sakaki Y, Hashiguchi T, Mizuno S (1984) Genus specificity and extensive methylation of the W chromosome-specific repetitive DNA sequences from the domestic fowl,Gallus gallus domesticus.Chromosoma 89: 228–237.

    Article  PubMed  Google Scholar 

  • Varley JM, Macgregor HC, Erba HP (1980) Satellite DNA is transcribed on lampbrush chromosomes.Nature 283: 686–688.

    Article  PubMed  Google Scholar 

  • Waalwijk C, Flavell RA (1978)MspI, an isoschizomer ofHpaII which cleaves both unmethylated and methylatedHpaII sites.Nucleic Acids Res 5: 3231–3236.

    PubMed  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

accepted for publication by M. Schmid

Rights and permissions

Reprints and permissions

About this article

Cite this article

Hori, T., Suzuki, Y., Solovei, I. et al. Characterization of DNA sequences constituting the terminal heterochromatin of the chicken Z chromosome. Chromosome Res 4, 411–426 (1996). https://doi.org/10.1007/BF02265048

Download citation

  • Received:

  • Revised:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF02265048

Key words

Navigation