Skip to main content
Log in

Defining functional drug-interaction domains on topoisomerase II by exploiting mechanistic differences between drug classes

  • Session 1: Topoisomerase Basic Science
  • Drug-Interaction Domains, Topoisomerase II, DNA Strand-Break, DNA Strand-Passage
  • Published:
Cancer Chemotherapy and Pharmacology Aims and scope Submit manuscript

Abstract

Topoisomerase II is the primary cellular target for a variety of antineoplastic drugs that are active against human cancers. These drugs exert their cytotoxic effects by stabilizing covalent topoisomerase II-cleaved DNA complexes that are fleeting intermediates in the catalytic cycle of the enzyme. Despite this common feature of drug action, a number of mechanistic differences between drug classes have been described. These mechanistic differences (including effects on DNA cleavage/religation, DNA strand passage, and adenosine triphosphate hydrolysis) were used as the basis for a series of competition experiments to determine whether different compounds share a common site of action on topoisomerase II or interact at distinct sites. Results of the present study strongly suggest that at least four structurally disparate antineoplastic drugs, etoposide, amsacrine, genistein, and the quinolone CP-115,953, share an overlapping interaction domain on the enzyme.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Abbreviations

SDS:

sodium dodecyl sulfate

APP(NH)P:

adenyl-5′-yl-β,γ-imidodiphosphate

References

  1. Andersson HC, Kihlman BA (1989) The production of chromosomal alterations in human lymphocytes by drugs known to interfere with the activity of DNA topoisomerase II. I.m-AMSA. Carcinogenesis 10: 123–130

    Google Scholar 

  2. Bishop JF (1992) Etoposide in the treatment of leukemias. Semin Oncol 19: 33–38

    Google Scholar 

  3. Chow KC, MacDonald TL, Ross WE (1988) DNA binding by epipodophyllotoxins andN-acyl anthracyclines: implications for mechanism of topoisomerase II inhibition. Mol Pharmacol 34: 467–473

    Google Scholar 

  4. Corbett AH, Osheroff N (1993) When good enzymes go bad: conversion of topoisomerase II to a cellular toxin by antineoplastic drugs. Chem Res Toxicol 6: 585–597

    Google Scholar 

  5. Corbett AH, Zechiedrich EL, Lloyd RS, Osheroff N (1991) Inhibition of eukaryotic topoisomerase II by ultraviolet-induced cyclobutane pyrimidine dimers. J Biol Chem 266: 19666–19671

    Google Scholar 

  6. Corbett AH, Hong D, Osheroff N (1993) Exploiting mechanistic differences between drug classes to define functional drug interaction domains on topoisomerase II: evidence that several diverse DNA cleavage-enhancing agents share a common site of action on the enzyme. J Biol Chem 268: 14394–14398

    Google Scholar 

  7. Corbett AH, Guerry P, Pflieger P, Osheroff N (1994) A pyrimido[1,6-a]benzimidazole that enhances DNA cleavage mediated by eukaryotic topoisomerase II: a novel class of topoisomerase II-targeted drugs with cytotoxic potential. Antimicrob Agents Chemother 37: 2599–2605

    Google Scholar 

  8. Danks MK, Yolowich JC, Beck WT (1987) Atypical multiple drug resistance in a human leukemic cell line selected for resistance to teniposide (VM-26). Cancer Res 47: 1297–1301

    Google Scholar 

  9. Danks MK, Schmidt CA, Cirtain MC, Suttle DP, Beck WT (1988) Altered catalytic activity of and DNA cleavage by DNA topoisomerase II from human leukemic cells selected for resistance to VM-26. Biochemistry 27: 8861–8869

    Google Scholar 

  10. D'Arpa P, Beardmore C, Liu LF (1990) Involvement of nucleic acid synthesis in cell killing mechanisms of topoisomerase II poisons. Cancer Res 50: 6919–6924

    Google Scholar 

  11. DeVore R, Whitlock J, Hainsworth T, Johnson D (1989) Therapy-related acute nonlymphocytic leukemia with monocytic features and rearrangement of chromosome 11q. Ann Intern Med 110: 740–742

    Google Scholar 

  12. DeVore R, Hainsworth J, Breco FA, Hande K, Johnson D (1992) Chronic oral etoposide in the treatment of lung cancer. Semin Oncol 19: 28–35

    Google Scholar 

  13. Elsea SH, McGuirk PR, Gootz TD, Moynihan M, Osheroff N (1993) Drug features that contribute to the activity of quinolones against mammalian topoisomerase II and cultured cells: correlation between the enhancement of enzyme-mediated DNA cleavage in vitro and cytotoxic potential. Antimicrob Agents Chemother 37: 2179–2186

    Google Scholar 

  14. Graaf WT van der, Vries EG de (1990) Mitoxantrone: bluebeard for malignancies. Anticancer Drugs 1: 109–125

    Google Scholar 

  15. Han Y-H, Austin MJF, Pommier Y, Povirk LF (1993) Small deletion and insertion mutations induced by the topoisomerase II inhibitor teniposide in CHO cells and comparison with sites of drug-stimulated DNA cleavage in vitro. J Mol Biol 229: 52–66

    Google Scholar 

  16. Hickman JA (1992) Apoptosis induced by anticancer drugs. Cancer Metastasis Rev 11: 121–139

    Google Scholar 

  17. Kaufman S (1989) Induction of endonucleolytic DNA cleavage in human acute myelogenous leukemia cells by etoposide, camptothecin, and other cytotoxic anticancer drugs: a cautionary note. Cancer Res 49: 5870–5878

    Google Scholar 

  18. Lindsley JE, Wang JC (1991) Proteolysis patterns of epitopically labeled yeast DNA topoisomerase II suggest an allosteric transition in the enzyme induced by ATP binding. Proc Natl Acad Sci USA 88: 10485–10489

    Google Scholar 

  19. Lindsley JE, Wang JC (1993) On the coupling between ATP usage and DNA transport by yeast DNA topoisomerase II. J Biol Chem 268: 8096–8104

    Google Scholar 

  20. Liu LF (1989) DNA topoisomerase poisons as antineoplastic drugs. Annu Rev Biochem 58: 351–375

    Google Scholar 

  21. Liu LF, Rowe TC, Yang L, Tewey KM, Chen GL (1983) Cleavage of DNA by mammalian DNA topoisomerase II. J Biol Chem 258: 15365–15370

    Google Scholar 

  22. Lönn U, Lönn S, Nylen U, Winbald G (1989) Altered formation of DNA in human cells treated with inhibitors of DNA topoisomerase II (etoposide and teniposide). Cancer Res 49: 6202–6207

    Google Scholar 

  23. Minford J, Pommier Y, Filipski J, Kohn KW, Kerrigan D, Mattern M, Michaels S, Schwartz R, Zwelling LA (1986) Isolation of intercalator-dependent protein-linked DNA strand cleavage activity from cell nuclei and identification as topoisomerase II. Biochemistry 25: 9–16

    Google Scholar 

  24. Osheroff N (1986) Eukaryotic topoisomerase II: characterization of enzyme turnover. J Biol Chem 261: 9944–9950

    Google Scholar 

  25. Osheroff N (1987) Role of the divalent cation in topoisomerase II mediated reactions. Biochemistry 26: 6402–6406

    Google Scholar 

  26. Osheroff N (1989) Effect of antineoplastic agents on the DNA cleavage/religation equilibrium of eukaryotic topoisomerase II: inhibition of DNA religation by etoposide. Biochemistry 28: 6157–6160

    Google Scholar 

  27. Osheroff N (1989) Biochemical basis for the interactions of type I and type II topoisomerases with DNA. Pharmacol Ther 41: 223–241

    Google Scholar 

  28. Osheroff N, Shelton ER, Brutlag DL (1983) DNA topoisomerase II fromDrosophila melanogaster: relaxation of supercoiled DNA. J Biol Chem 258: 9536–9543

    Google Scholar 

  29. Osheroff N, Zechiedrich EL, Gale KC (1991) Catalytic function of DNA topoisomerase II. BioEssays 13: 269–283

    Google Scholar 

  30. Pinedo HM, Chabner BA, Longo DL (1988) Cancer chemotherapy and biological response modifications, annual 9. Elsevier, Amsterdam

    Google Scholar 

  31. Pommier Y (1993) DNA topoisomerase I and II in cancer chemotherapy: update and perspectives. Cancer Chemother Pharmacol 32: 103–108

    Google Scholar 

  32. Pommier Y, Schwartz RE, Kohn KW, Zwelling LA (1984) Formation and rejoining of deoxyribonucleic acid double-strand breaks induced in isolated cell nuclei by antineoplastic intercalating agents. Biochemistry 23: 3194–3201

    Google Scholar 

  33. Pommier Y, Schwartz RE, Zwelling LA, Kohn KW (1985) Effects of DNA intercalating agents on topoisomerase II induced DNA strand cleavage in isolated mammalian cell nuclei. Biochemistry 24: 6406–6410

    Google Scholar 

  34. Potmesil M, Silber R (1990) DNA topoisomerases in clinical oncology. In: Cozzarelli NR, Wang JC (eds) DNA topology and its biological effects. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, PP 391–407

    Google Scholar 

  35. Reece RJ, Maxwell A (1991) DNA gyrase: structure and function. CRC Crit Rev Biochem Mol Biol 26: 335–375

    Google Scholar 

  36. Renault G, Malvy C, Venegas W, Larsen AK (1987) In vivo exposure to four ellipticine derivatives with topoisomerase inhibitory activity results in chromosome clumping and sister chromatid exchange in murine bone marrow cells. Toxicol Appl Pharmacol 89: 281–286

    Google Scholar 

  37. Robinson MJ, Osheroff N (1990) Stabilization of the topoisomerase II-DNA cleavage complex by antineoplastic drugs: inhibition of enzyme-mediated DNA religation by 4′-(9-acridinylamino) methanesulfon-m-anisidide. Biochemistry 29: 2511–2515

    Google Scholar 

  38. Robinson MJ, Osheroff N (1991) Effects of antineoplastic drugs on the post-strand passage DNA cleavage/religation equilibrium of topoisomerase II. Biochemistry 30: 1807–1813

    Google Scholar 

  39. Robinson MJ, Martin BA, Gootz TD, McGuirk PR, Moynihan M, Sutcliffe JA, Osheroff N (1991) Effects of quinolone derivatives on eukaryotic topoisomerase II: a novel mechanism for enhancement of enzyme-mediated DNA cleavage. J Biol Chem 266: 14585–14592

    Google Scholar 

  40. Robinson MJ, Martin BA, Gootz TD, McGuirk PR, Osheroff N (1992) Effects of novel fluoroquinolones on the catalytic activities of eukaryotic topoisomerase II: influence of the C-8 fluorine group. Antimicrob Agents Chemother 36: 751–756

    Google Scholar 

  41. Robinson MJ, Corbett AH, Osheroff N (1993) Effects of topoisomerase II-targeted drugs on enzyme-mediated DNA cleavage and ATP hydrolysis: evidence for distinct drug interaction domains on topoisomerase II. Biochemistry 32: 3638–3643

    Google Scholar 

  42. Roca J, Wang JC (1992) The capture of a DNA double helix by an ATP-dependent protein clamp: a key step in DNA transport by type II DNA topoisomerases. Cell 71: 833–840

    Google Scholar 

  43. Roca J, Berger JM, Wang JC (1993) On the simultaneous binding of eukaryotic DNA topoisomerase II to a pair of double-stranded DNA helices. J Biol Chem 268: 14250–14255

    Google Scholar 

  44. Ross WE, Glaubiger DL, Kohn KW (1978) Protein-associated DNA breaks in cells treated with adriamycin or ellipticine. Biochim Biophys Acta 519: 23–30

    Google Scholar 

  45. Ross WE, Glaubiger DL, Kohn KW (1979) Qualitative and quantitative aspects of intercalator-induced DNA strand breaks. Biochim Biophys Acta 562: 41–50

    Google Scholar 

  46. Rowe TC, Tewey KM, Liu LF (1984) Identification of the breakage-reunion subunit of T4 DNA topoisomerase. J Biol Chem 259: 9177–9181

    Google Scholar 

  47. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning: a laboratory manual, 2nd edn. Cold Spring Harbor Laboratory, Cold Spring Harbor, pp 9.31–9.57

    Google Scholar 

  48. Sander M, Hsieh T-S (1983) Double-strand DNA cleavage by type II DNA topoisomerase fromDrosophila melanogaster. J Biol Chem 258: 8421–8428

    Google Scholar 

  49. Schneider E, Lawson PA, Ralph RK (1989) Inhibition of protein synthesis reduceds the cytotoxicity of 4′-(9-acridinylamino) methanesulfon-m-anisidide without affecting DNA breakage and DNA topoisomerase II in a murine mastocytoma cell line. Biochem Pharmacol 38: 263–269

    Google Scholar 

  50. Schneider E, Hsiang Y-H, Liu LF (1990) DNA topoisomerases as anticancer drug targets. Adv Pharmacol 21: 149–183

    Google Scholar 

  51. Shelton ER, Osheroff N, Brutlag DL (1983) DNA topoisomerase II fromDrosophila melanogaster: purification and physical characterization. J Biol Chem 258: 9530–9535

    Google Scholar 

  52. Sinha BK, Politi PM (1990) Anthracyclines. Cancer Chemother Biol Response Modifiers 11: 45–57

    Google Scholar 

  53. Snapka RM, Permana PA (1993) SV40 DNA replication intermediates: analysis of drugs which target mammalian DNA replication. BioEssays 15: 121–127

    Google Scholar 

  54. Slorensen BS, Jensen PS, Andersen AH, Christiansen K, Alsner J, Thomsen B, Westergaard O (1990) Stimulation of topoisomerase II mediated DNA cleavage by the 2-nitroimidazole Ro 15-0216. Biochemistry 29: 9507–9515

    Google Scholar 

  55. Slorensen BS, Sinding J, Andersen AH, Alsner J, Jensen PB, Westergaard O (1992) Mode of action of topoisomerase II-targeting agents at a specific DNA sequence: uncoupling the DNA binding, cleavage and religation events. J Mol Biol 228: 778–786

    Google Scholar 

  56. Sullivan DM, Latham MD, Rowe TC, Ross WE (1989) Purification and characterization of an altered topoisomerase II from a drug-resistant Chinese hamster ovary cell line. Biochemistry 28: 5680–5687

    Google Scholar 

  57. Wang JC (1985) DNA topoisomerases. Annu Rev Biochem 54: 665–697

    Google Scholar 

  58. Wang JC, Liu LF (1990) DNA replication: topological aspects and the roles of DNA topoisomerases. In: Cozzarelli NR, Wang JC (eds) DNA topology and its biological effects. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, pp 321–340

    Google Scholar 

  59. Wang JC, Caron PR, Kim RA (1990) The role of DNA topoisomerases in recombination and genome instability: a double edged sword? Cell 62: 403–406

    Google Scholar 

  60. Wilson WR, Baguley BC, Wakelin LPG, Waring MJ (1981) Interaction of the antitumor drug 4′-(9-acridinylamino)-methanesulfon-m-anisidide and related acridines with nucleic acids. Mol Pharmacol 20: 404–414

    Google Scholar 

  61. Worland ST, Wang JC (1989) Inducible overexpression, purification, and active site mapping of DNA topoisomerase II from the yeastSaccharomyces cerevisiae. J Biol Chem 264: 4412–4416

    Google Scholar 

  62. Yamashita Y, Kawada S, Nakano H (1990) Induction of mammalian topoisomerase II dependent DNA cleavage by nonintercalative flavonoids, genistein and orobol. Biochem Pharmacol 39: 737–744

    Google Scholar 

  63. Yang L, Rowe TC, Liu LF (1985) Identification of DNA topoisomerase II as an intracellular target of antitumour epipodophyllotoxins in simian virus 40-infected monkey cells. Cancer Res 45: 5872–5876

    Google Scholar 

  64. Yang L, Rowe TC, Nelson EM, Liu LF (1985) In vivo mapping of DNA topoisomerase II-specific cleavage sites in SV40 chromatin. Cell 41: 127–132

    Google Scholar 

  65. Zechiedrich EL, Osheroff N (1990) Eukaryotic topoisomerase II recognizes nucleic acid toplogy by preferentially interacting with DNA crossovers. EMBO J 9: 4555–4562

    Google Scholar 

  66. Zhang H, D'Arpa P, Liu LF (1990) A model for tumor cell killing by topoisomerase II poisons. Cancer Cells 2: 23–27

    Google Scholar 

  67. Zwelling LA, Michaels S, Erickson LC, Ungerleider RS, Nichols M, Kohn KW (1981) Protein-associated deoxyribonucleic acid strand breaks in L1210 cells treated with the deoxyribonucleic acid intercalating agents 4′-(9-acridinylamino)methanesulfon-m-anisidide and adriamycin. Biochemistry 20: 6553–6563

    Google Scholar 

  68. Zwelling LA, Hinds M, Chan D, Mayes J, Sie KL, Parker E, Silberman L, Radcliffe A, Beran M, Blick M (1989) Characterization of an amsacrine-resistant line of human leukemia cells. J Biol Chem 264: 16411–16420

    Google Scholar 

  69. Zwelling LA, Mayes J, Hinds M, Chan D, Altschuler E, Carroll B, Parker E, Deisseroth K, Radcliffe A, Seligman M, Li L, Farquhar D (1991) Cross-resistant human leukemia line to topoisomerase II reactive DNA intercalating agents. Evidence for two topoisomerase II directed drug actions. Biochemistry 30: 4048–4055

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

This study was supported by grants GM33944 and CA09582 from the National Institutes of Health and by Research Grant NP-812 and Faculty Research Award FRA-370 from the American Cancer Society

Rights and permissions

Reprints and permissions

About this article

Cite this article

Osheroff, N., Corbett, A.H., Elsea, S.H. et al. Defining functional drug-interaction domains on topoisomerase II by exploiting mechanistic differences between drug classes. Cancer Chemother. Pharmacol. 34 (Suppl 1), S19–S25 (1994). https://doi.org/10.1007/BF00684859

Download citation

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00684859

Key words

Navigation