Skip to main content
Log in

Sequence determination of a transcribed rabbit class II gene with homology to HLA-DQ α

  • Original Investigations
  • Published:
Immunogenetics Aims and scope Submit manuscript

Abstract

The human HLA-DQ α probe was used to screen genomic and cDNA libraries constructed from a rabbit T-cell line. Clones containing highly homologous sequences were obtained from both libraries and their sequences were determined. The organization of the RLA-DQ gene was determined by comparison of the nucleotide sequences of the genomic clone to that of the corresponding cDNA clone. This analysis allowed assignment of the complete structure of the RLA-DQ α chain. Comparisons with human and mouse class II products revealed that RLA-DQ is more closely related to HLA-DQ/DX than to H-2 A. In contrast to the DQ/DX region of man, which contains at least two distinct alpha genes, the rabbit genome contains a single DQ gene which is equally distant from the HLA-DQ or -DX genes. The rabbit DQ α gene, like human HLA-DQ, is transcribed in T cells.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

Abbreviations

RLA :

rabbit major histocompatibility complex

HLA :

human major histocompatibility complex

SSC :

0.15 M sodium chloride, 0.015 M sodium citrate

References

  • Auffray, C. and Strominger, J. L.: Molecular genetics of the human major bistocompatibility complex. Adv. Hum. Genet. 15: 197–247, 1986

    Google Scholar 

  • Auffray, C., Korman, A. J., Roux-Dosseto,M.,Bono, R., and Strominger, J. L.: cDNA clone for the heavy chain of the human B cell alloantigen DC1: Strong sequence homology to the HLA-DR heavy chain. Proc. Natl. Acad. Sci. U.S.A. 79: 6337–6341, 1982

    Google Scholar 

  • Auffray, C., Elie, J. W., Arnot, D., Grossberger, D., Kappes, D., and Strominger, J. L.: Isotopic and allotypic variation of human class 11 histocompatibility antigen a-chain genes. Nature 308: 327–333, 1984

    Google Scholar 

  • Benoist, C. O., Mathis, D. J., Kanter, M. R., Williams, V. E., and McDevitt, H. O.: Regions of allelic hypervariability in the murine Au immune response gene. Cell 34: 169–177, 1983

    Google Scholar 

  • Breatnach, R. and Chambon, P.: Organization and expression of eucaryotic split genes coding for proteins. Annu. Rev. Biochem. 50t: 349–383, 1981

    Google Scholar 

  • Chang, H. C., Moriuchi, T., and Silver, J.: The heavy chain of human B-cell alloantigen HLA-DS has a variable N terminal region and a constant immunoglobulin like region. Nature 305: 813–815, 1983

    Google Scholar 

  • Dale, R. M. K., McClure, B. A., and Houchins, J. P.: A rapid singlestrand cloning strategy for producing a sequential series of overlapping clones for use in DNA sequencing: Application to sequencing the corn mitochondrial 18 Sr DNA. Plasmid 13: 31–40, 1985

    Google Scholar 

  • Das, H. K., Lawrance, S. K., and Weissman, J. M.: Structure and nucleotide sequence of the heavy chain gene of HLA-DR. Proc. Natl. Acad. Sci. U.S.A. 80: 3542–3547, 1983

    Google Scholar 

  • Figueroa, F. and Klein, J.: The evolution of class II genes. Immunol. Today 7: 78–81, 1986

    Google Scholar 

  • Götze, D. (ed.): The Major Histocompatibility System in Man and Animals, Springer-Verlag, Berlin, 1977

    Google Scholar 

  • Klein, J.: Biology of the Mouse Histocompatibility-2 Complex, Springer-Verlag, Berlin, 1975

    Google Scholar 

  • Klein, J.: The major histocompatibility complex of the mouse. Science 203: 516–521, 1979

    Google Scholar 

  • Klein, J.: Natural History of the Major Histocompatibility Complex. John Wiley, New York, 1986

    Google Scholar 

  • Lancki, D. W., Tissot, R. G., and Cohen, C. P.: Histocompatibility of the rabbit. Genetic control of the rabbit mixed lymphocyte culture reactivity. Transplantation 27: 79–85, 1979

    Google Scholar 

  • LeGuern, C., Marche, P. N., and Kindt, T. J.: Molecular evidence for five distinct MHC class II a genes in the rabbit. Immunogenetics 22: 141–148, 1985

    Google Scholar 

  • Marche, P. N. and Kindt, T. J.: Two distinct T -cell receptor alpha-chain transcripts in a rabbit T -cell line: Implications for allelic exclusion in T cells. Proc. Natl. Acad. Sci. U.S.A. 83: 2190–2194, 1986a

    Google Scholar 

  • Marche, P. N. and Kindt, T. J.: A variable region gene subfamily encoding T cell receptor beta chains is selectively conserved among mammals. J. Immunol. 137: 1729–1734, 1986b

    Google Scholar 

  • Marche, P. N., Tykocinski, M. L., Max, E. E., and Kindt, T. J.: Structure of functional rabbit class I MHC gene: Similarity to human class I genes. Immunogenetics 21: 71–82, 1985

    Google Scholar 

  • McNicholas, J., Steinmetz, M., Hunkapillar, T., Jones, P., and Hood, L.: DNA sequence of the gene encoding the Ea Ia polypeptide of the BALB/c mouse. Science 218: 1229–1232, 1982

    Google Scholar 

  • Moriuchi, J., Moriuchi, T., and Silver, J.: Nucleotide sequence of an HLA DQα chain derived from a DRW9 cell line: Genetic and evolutionary implications. Proc. Nad. Acad. Sci. U.S.A. 82: 3420–3424, 1985

    Google Scholar 

  • Queen, C. L. and Korn, L. J.: Computer analysis of nucleic acids and proteins. Methods Enzymol. 65: 595–609, 1980

    Google Scholar 

  • Sanger, F., Nicklen, S., and Coulson, A. R.: DNA sequencing with chain-terminating inhibitors. Proc. Nad. Acad. Sci. U.S.A. 74: 5463–5467, 1977

    Google Scholar 

  • Schenning, L., Larhammar, D., Bill, P., Wiman, K., Jonsson, A. K., Rask, L., and Peterson, P. A.: Both α and β chains of HLA-DC class 11 histocompatibility antigens display extensive polymorphism in their amino-terminal domains. EMBO J. 4: 447–452, 1984

    Google Scholar 

  • Sittisombut, N. and Knight, K. L.: Rabbit major histocompatibility complex. I. Isolation and characterization of three subregions of class II genes. J. Immunol. 136: 1871–1875, 1986

    Google Scholar 

  • Trowsdale, J. and Kelly, A.: The human HLA class II a chain gene DZ is distinct from genes in the DP, DQ and DR subregions. EMBO J. 4: 2231–2237, 1985

    Google Scholar 

  • Trowsdale, J., Young, J. A. T., Kelly, A. P., Austin, P. J., Carson, S., Meunier, H., So, A., Erlich, H. A., Spieman, R. S., Bodmer, J., and Bodmer, W. E.: Structure, sequence and polymorphism in the HLQD region. Immunol. Rev. 85: 5–43, 1985

    Google Scholar 

  • Tykocinski, M. L., Marche, P. N., Max, E. E., and Kindt, T. J.: Rabbit class I MHC genes: cDNA clones define full length transcripts of an expressed gene and a putative pseudogene. J. Immunol. 133: 2261–2269, 1984

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

LeGuern, C., Weissman, J.D., Marcher, P.N. et al. Sequence determination of a transcribed rabbit class II gene with homology to HLA-DQ α . Immunogenetics 25, 104–109 (1987). https://doi.org/10.1007/BF00364275

Download citation

  • Received:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00364275

Keywords

Navigation