Skip to main content
Log in

Genomic organization and nucleotide sequence of a long mosaic repetitive DNA in the mouse genome

  • Original Contributions
  • Published:
Mammalian Genome Aims and scope Submit manuscript

Abstract

A long mosaic repetitive sequence (LMRS) was isolated from a mouse liver genome library using a mouse repetitive DNA as a probe. LMRS exhibits the following features: (1) it is almost 15 kb in length; (2) it is partly organized in tandem array and frequently interrupted by other repeated sequences; and (3) it is located predominantly on the A3 band of the mouse X Chromosome (Chr). One fragment of LMRS (B6) shows restriction fragment length polymorphism (RFLP) between different mouse strains, and is thus potentially useful for mapping studies. The nucleotide sequence confirms a mosaic organization of LMRS which includes three repeats in the 5′ part, showing similarity with the 5′ end of L1Md-A2, and seven long A+T rich segments in the central part of the element. Our findings suggest that this sequence may have arisen from the duplication of an ancestral motif and has expanded by successive waves of amplification and invasion by foreign sequences.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Brown, S.D.M. and Dover, G.A.: Conservation of segmental variants of satellite DNA of Mus musculus in a related species: Mus spretus. Nature 285: 47–49, 1980.

    Google Scholar 

  • Decoville, M., Malfoy, B., and Locker, D.: Studies of a novel repetitive sequence family in the genome of mice. Eur J Biochem 174: 679–684, 1988.

    Google Scholar 

  • Disteche, C.M., Gandy, S.L., and Adler, D.A.: Translocation and amplification of an X-chromosome DNA repeat in inbred strains of mice. Nucl Acids Res 15: 4393–4401, 1987.

    Google Scholar 

  • Horz, W. and Altenburger, W.: Nucleotide sequence of mouse satellite. Nucl Acids Res 9: 683–696, 1981.

    Google Scholar 

  • Loeb, D.D., Padgett, R.W., Hardies, S.C., Shehee, W.R., Comer, M.B., Edgell, M.H., and Hutchison III, C.A.: The sequence of a large L1Md element reveals a tandemly repeated 5′ end and several features found in retrotransposons. Mol Cell Biol 6: 1561–1571, 1986.

    Google Scholar 

  • Maniatis, T., Fritsh, E.F., and Sambrook, J.: Molecular Cloning: A Laboratory Manual, Cold Spring Harbor Laboratory Press, New York, 1982.

    Google Scholar 

  • Miklos, G.L.G.: Localized highly repetitive DNA sequences invertebrate and invertebrate genomes. In R.J. MacIntyre (ed.); Molecular Evolutionary Genetics, pp. 241–321, Plenum Press, New York, 1985.

    Google Scholar 

  • Nasir, J., Fisher, E.M.C., Brockdorff, N., Disteche, C.M., Lyon, M.F., and Brown, S.D.M.: Unusual molecular characteristics of a repeat sequence island within a Giemsa-positive band on the mouse X chromosome. Proc Natl Acad Sci USA 87: 399–403, 1990.

    Google Scholar 

  • Rice, N.R. and Strauss, N.A.: Relatedness of mouse satellite deoxyribonucleic acid to deoxyribonucleic acid of various Mus species. Proc Natl Acad Sci USA 70: 3546–3550, 1973.

    Google Scholar 

  • Sanger, F., Nicklen, S., and Coulson, A.R.: DNA sequencing with chain terminating inhibitors. Proc Natl Acad Sci USA 74: 5463–5467, 1977.

    Google Scholar 

  • Singer, M.F.: SINEs and LINEs, highly repeated short and long interspersed sequences in mammalian genomes. Cell 28: 433–434, 1982.

    Google Scholar 

  • Southern, E.M.: Long range periodicities in mouse satellite DNA. J Mol Biol 94: 51–69, 1975.

    Google Scholar 

  • Viegas-Pequignot, E., Dutrillaux, B., Magdelenat, H., and Coppey-Moisan, M.: Mapping single-copy DNA sequences on human chromosomes by in situ hybridization with biotinylated probes: Enhancement of detection sensitivity by intensified-fluorescence digital-imaging microscopy. Proc Natl Acad Sci USA 86: 582–586, 1989.

    Google Scholar 

  • Vogt, P.: Potential genetic functions of tandem repeated DNA sequence blocks in the human genome are based on a highly conserved “chromatin folding code.” Hum Genet 84: 301–336, 1990.

    Google Scholar 

  • Weiner, A.M., Deininger, P.L., and Efstriadis, A.: Nonviral retroposons: Genes, pseudogenes and transposable elements generated by the reverse flow of genetic information. Ann Rev Biochem 55: 631–661, 1986.

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Additional information

The nucleotide sequence data reported in this paper have been submitted to EMBL and have been assigned the accession number X55036.

Rights and permissions

Reprints and permissions

About this article

Cite this article

Decoville, M., Moreau, P., Viégas-Péquignot, E. et al. Genomic organization and nucleotide sequence of a long mosaic repetitive DNA in the mouse genome. Mammalian Genome 2, 172–185 (1992). https://doi.org/10.1007/BF00302875

Download citation

  • Received:

  • Accepted:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00302875

Keywords

Navigation