Skip to main content
Log in

Positional cloning of cDNAs from the human chromosome 3p21–22 region identifies a clustered organization of zinc-finger genes

  • Original Investigation
  • Published:
Human Genetics Aims and scope Submit manuscript

Abstract

The human 3p21-22 region is frequently involved in karyotype rearrangements associated with malignancies. The high frequency of allelic loss in this region has been associated with virtually all small cell lung carcinomas and many renal carcinomas. These findings suggest that at least one tumor-suppressor gene might be located in 3p21-22. We have recently reported the isolation of a 750-kb yeast artificial chromosome (YAC) contig from 3p21-22. Here, we describe three new genes isolated from the 3p YAC contig by using a cDNA hybridization selection. Remarkably, the three new genes encode zinc-finger proteins, indicating the presence of a cluster of zinc-finger genes in human chromosome 3p21.

This is a preview of subscription content, log in via an institution to check access.

Access this article

Price excludes VAT (USA)
Tax calculation will be finalised during checkout.

Instant access to the full article PDF.

Similar content being viewed by others

References

  • Attar RM, Gilman MZ (1992) Expression cloning of a novel zinc finger protein that binds to the c-fos serum responsive element. Mol Cell Biol 12: 2432–2443

    Google Scholar 

  • Bellefroid EJ, Lecocq PJ, Benhida A, Poncelet DA, Belayew A, Martial JA (1989) The human genome contains hundreds of genes encoding zinc finger proteins of the Kruppel type. DNA8: 377–387

    Google Scholar 

  • Bellefroid EJ, Poncelet DA, Lecocq PJ, Revelant O, Martial JA (1991) The evolutionarily conserved Kruppel-associated box domain defines a subfamily of eukaryotic multifingered proteins. Proc Natl Acad Sci USA 88: 3608–3612

    Google Scholar 

  • Bellefroid EJ, Marine JC, Ried T, Lecocq PJ, Rivière M, Amemiya C, Poncelet DA, Colie PG, Jong P de, Szpirer C, Ward DC, Martial JA (1993) Clustered organization of homologous KRAB zinc-finger genes with enhanced expression in human T lymphoid cells. EMBO J 12: 1363–1374

    Google Scholar 

  • Brauch H, Johnson B, Hovis J, Yano T, Gazdar A, Pettengill OS, Graziano S, Soprenson GD, Poiesz BJ, Minna J, Linehan M, Zbar B (1987) Molecular analysis of the short arm of chromosome 3 in small cell and non small cell carcinoma of the lung. N Engl J Med 317: 1109–1113

    Google Scholar 

  • Chen Z, Brand NJ, Chen A, Chen SJ, Tong J, Wang Z, Waxman S, Zelent A (1993) Fusion between a novel Kruppel-like zinc finger gene and the retinoic acid receptor — a locus due to a variant t (11;17) translocation associated with acute promyelocytic leukaemia. EMBO J 12: 1161–1167

    Google Scholar 

  • Chowdhury K, Goulding M, Walther C, Imai K, Fickenscher H (1992) The ubiquitous transactivator Zfp-38 is upregulated during spermatogenesis with differential transcription. Mech Dev39: 129–142

    Google Scholar 

  • De Theé H, Lavan C, Marchio A, Chomienne C, Degosa L, Dejean A (1991) The PML-RAR fusion mRNA generated by the t(15;17) translocation in acute promyelocytic leukemia encode a functionally altered RAR. Cell 66: 675–684

    Google Scholar 

  • Denny P, Ashworth A (1991) A zinc otein-encoding gene expressed in the post-meiotic phase of spermatogenesis. Gene 106: 221–227

    Google Scholar 

  • Djabali M, Selleri L, Parry P, Ainger prBower M, Young BD, Evans GA (1992) A tritorax-like gene is interrupted by chromosome 11q23 translocations in acute leukemias. Nature Genet 2: 113–118

    Google Scholar 

  • El-Baradi T, Pieler T (1991) Zinc finger proteins: what we know and what we would like to know. Mech Dev 35: 155–169

    Google Scholar 

  • Featherstone T, Huxley C (1993) Extrachromosomal maintenance and amplification of the yeast artificial chromosome DNA in mouse cells Genomics 17: 267–278

    Google Scholar 

  • Ganly PS, Jarad N, Rudd RM, Rabbitts PH (1992) PCR-based RFLP analysis allows genotyping of the short arm of chromosome 3 in small biopsies from patients with lung cancer. Genomics 12: 221–228

    Google Scholar 

  • Haber DA, Buckler AJ, Glaser T, Call KM, Pelletier J, Sohn RL, Douglass EC, Housman DE (1990) An internal deletion within an 11p13 zinc finger gene contributes to the development of Wilms' tumor. Cell 61: 1257–1269

    Google Scholar 

  • Kerckaert JP, Deweindt C, Tilly H, Quief S, Lecocq G, Bastard C (1993) LAZ3, a novel zinc-finger encoding gene, is disrupted by recurring chromosome 3q27 translocations in human lymphomas. Nature Genet 5: 66–70

    Google Scholar 

  • Kok K, Songa J, Carritt B, Davies MB, Hout A van der, Veen AY van der, Landvater RM, Liej L de, Berendsen HH, Postmus PE, Poppema S, Buys C (1987) Deletion of a DNA sequence at the chromosomal region 3p21 in all major types of lung cancer. Nature 330: 578–581

    Google Scholar 

  • Lanfrancone L, Pengue G, Pandolfi PP, Salcini AE, Giacomuzzi A, Longo L, Donti E, De Luca P, La Mantia G, Pelicci PG, Lania L (1992) Structural and functional organization of the HF10 human zinc finger gene (ZNF35) located on chromosome 3p21–22. Genomics 12: 720–728

    Google Scholar 

  • Morishita K, Parker DS, Mucenski ML, Jenkins NA, Copeland NG, Ihle JN (1988) Retroviral activation of a novel gene encoding a zinc finger protein in IL-3-dependent myeloid leuk emia cell lines. Cell 54: 831–840

    Google Scholar 

  • Naylor SL, Johnson BE, Minna JD, Sakaghuchi AY (1987) Loss of heterozygosity of chromosome 3p markers in small cell lung cancer. Nature 329: 451–454

    Google Scholar 

  • Pengue G, Calabrò V, Cannada-Bartoli P, De Luca P, Esposito T, Taillon-Miller P, LaForgia S, Druck T, Huebner K, D'Urso M, Lania L (1993) YAC-assisted cloning of transcribed sequences from the human chromosome p21 region. Hum Mol Genet 2: 791–796

    Google Scholar 

  • Tunnacliffe A, Liu L, Moore JK, Leversha MA, Jackson MS, Papi L, Ferguson-Smith MA, Thiesen HJ, Ponder BAJ (1993) Duplicated KOX zinc finger gene clusters flank the centromere of uman chromosome 10: evidence for a pericentric inversion during primate evolution. Nucleic Acids Res 21: 1409–1417

    Google Scholar 

  • Ye BH, Lista F, Lo Coco F, Knowles DM, Offit K, Chaganti RSK, Dalla-Favera R (1993) Alterations of a zinc finger-encoding gene, BCL-6, in diffuse large-cell lymphoma. Science 262: 747–750

    Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Rights and permissions

Reprints and permissions

About this article

Cite this article

Calabrò, V., Pengue, G., Bartoli, P.C. et al. Positional cloning of cDNAs from the human chromosome 3p21–22 region identifies a clustered organization of zinc-finger genes. Hum Genet 95, 18–21 (1995). https://doi.org/10.1007/BF00225067

Download citation

  • Received:

  • Revised:

  • Issue Date:

  • DOI: https://doi.org/10.1007/BF00225067

Keywords

Navigation