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A Context-Based Schema Integration Process Applied to Healthcare Data Sources

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Book cover On the Move to Meaningful Internet Systems: OTM 2010 Workshops (OTM 2010)

Part of the book series: Lecture Notes in Computer Science ((LNISA,volume 6428))

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Abstract

Decision-making in healthcare mainly depends on the integration of distributed health information contained in multiple, autonomous and heterogeneous data sources. Many information integration systems have been proposed as a way of offering a concise and uniform view of the distributed data, abstracting out their syntactic, structural and semantic diversities. This paper proposes a context-based schema integration process for a mediator-based information integration system applied to healthcare data sources. The distinguishing feature of this process is to explore and model the contextual information needed for schema-level sense disambiguation in its different steps. This process tackles the semantics of data source schema elements by identifying their meanings and, thereafter, establishing semantic affinities among them. The contextual information is modeled using an ontology-based approach enabling reasoning, reusability and sharing of information.

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References

  1. Brazhnik, O., Jones, J.: Anatomy of Data Integration. J. Bio. Inform. 40(3), 252–269 (2007)

    Article  Google Scholar 

  2. Sheth, A., Kashyap, V.: So Far (Schematically), yet so near (semantically). IFIP TC2/WG2.6 (1992)

    Google Scholar 

  3. Chiticariu, L., Hernández, M., Kolaitis, P., Popa, L.: Semi-automatic schema integration in Clio. In: 33rd International VLDB Conference, pp. 1326–1329 (2007)

    Google Scholar 

  4. Bohannon, P., Elnahrawy, E., Fan, W., Flaster, M.: Putting context into schema Matching. In: 32nd International VLDB Conference, pp. 307–318 (2006)

    Google Scholar 

  5. Madhavan, J., Bernstein, P., Rahm, E.: Generic Schema Matching with Cupid. In: 27th VLDB Conference, Roma, Italy (2001)

    Google Scholar 

  6. Madria, S., Passi, K., Bhowmick, S.: An XML Schema Integration and Query Mechanism System. Data & Knowledge Engineering, 266–303 (2008)

    Google Scholar 

  7. Zamboulis, L., Martin, N., Poulovassilis, A.: Bioinformatics Service Reconciliation By Heterogeneous Schema Transformation. In: 4th International Conference on Data Integration in the Life Sciences, pp. 89–104 (2007)

    Google Scholar 

  8. Donelson, L., Tarczy-Hornock, P., Mork, P., Dolan, C., Mitchell, J., Barrier, M., Mei, H.: The BioMediator system as a data integration tool to answer diverse biologic queries. MEDINFO (2004)

    Google Scholar 

  9. Kontaxis, K., Sakellaris, G., Fotiadis, D.: Using XML and controlled vocabularies to achieve unambiguous knowledge acquisition from multiple heterogeneous medical data sources. In: IEEE Conference on Information Technology Applications in Biomedicine (2003)

    Google Scholar 

  10. Mork, P., Halevy, A., Tarczy-Hornoch, P.: A model for data integration systems of biomedical data applied to online genetic databases. In: AMIA Annual Symposium (2001)

    Google Scholar 

  11. Wiederhold, G.: Mediators in the architecture of future information systems. IEEE Computer 3(21), 38–50 (1992)

    Article  Google Scholar 

  12. Batini, C., Lanzerini, M., Navathe, S.: A comparative analysis of methodologies for database schema integration. ACM Computing Surveys 18(4), 323–364 (1986)

    Article  Google Scholar 

  13. Rahm, E., Bernstein, P.: A survey of approaches to automatic schema matching. VLDB Journal 10(4), 334–350 (2001)

    Article  MATH  Google Scholar 

  14. Kashyap, V., Sheth, A.: Semantic and schematic similarities between database objects: a context-based approach. The VLDB Journal 5, 276–304 (1996)

    Article  Google Scholar 

  15. Kim, W.: Modern Database Systems: The Object Model, Interoperability and Beyond. ACM Press, New York (1995) ISBN 0-201-59098-0

    MATH  Google Scholar 

  16. Storey, V.: Understanding Semantic Relationships. VLDB Journal 2(4), 455–488 (1993)

    Article  Google Scholar 

  17. Noy, N., McGuiness, D.: Ontology Development 101: A Guide to Creating Your First Ontology, CiteSeer (2001)

    Google Scholar 

  18. Dey, A.: Understanding and Using Context. Personal and Ubiquitous Computing Journal 5(1), 4–7 (2001)

    Article  MathSciNet  Google Scholar 

  19. Lóscio, B., Salgado, A., Galvão, L.: Conceptual Modeling of XML Schemas. In: International Conference on Conceptual Modeling ER (2003)

    Google Scholar 

  20. Belian, R.: A Context-based Name Resolution Approach for Semantic Schema Integration. PHD Thesis, Federal University of Pernambuco, Brazil (2008)

    Google Scholar 

  21. Vieira, V., Tedesco, P., Salgado, A., Brézillon, P.: Investigating the specifics of contextual elements management: The CEManTIKA Approach. In: Sixth International and Interdisciplinary Conference on Modeling and Using Context, pp. 493–506 (2007)

    Google Scholar 

  22. Souza, D., Belian, R., Salgado, A., Tedesco, P.: Towards a Context Ontology to Enhance Data Integration Processes. In: VLDB Workshop on Ontology-based Techniques for Databases in Information Systems and Knowledge Systems, pp. 49–56 (2008)

    Google Scholar 

  23. Batista, M., Salgado, A.: Minimality Quality Criterion Evaluation for Integrated Schemas. Journal of Information Assurance and Security 2, 275–287 (2007)

    Google Scholar 

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Belian, R.B., Salgado, A.C. (2010). A Context-Based Schema Integration Process Applied to Healthcare Data Sources. In: Meersman, R., Dillon, T., Herrero, P. (eds) On the Move to Meaningful Internet Systems: OTM 2010 Workshops. OTM 2010. Lecture Notes in Computer Science, vol 6428. Springer, Berlin, Heidelberg. https://doi.org/10.1007/978-3-642-16961-8_25

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  • DOI: https://doi.org/10.1007/978-3-642-16961-8_25

  • Publisher Name: Springer, Berlin, Heidelberg

  • Print ISBN: 978-3-642-16960-1

  • Online ISBN: 978-3-642-16961-8

  • eBook Packages: Computer ScienceComputer Science (R0)

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