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Symmetric Interleaved Geodesic Shooting in Diffeomorphisms

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Information Processing in Medical Imaging (IPMI 2017)

Part of the book series: Lecture Notes in Computer Science ((LNIP,volume 10265))

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Abstract

Many nonlinear registration algorithms are subject to an asymmetry with respect to the order of image inputs. Often, one image is considered the moving image while the other is fixed. Hence, the moving image is subject to additional interpolation relative to the fixed image. Further, the fixed image is in a way represented by the deformed moving image; any noise or artifacts present in the moving image are thus retained in this representation. This asymmetry has even been shown to result in bias in various forms of registration derived measurements. These problems are particularly evident in the geodesic shooting in diffeomorphisms context, where a continuous time geodesic model of image deformation is on the orbit of the moving image. Were the images input in the opposite order, the model would lie on the orbit of the other image. This paper presents a symmetrical formulation of the geodesic shooting in diffeomorphisms model with an accompanying algorithm that treats the intensity and gradient information in both images in nearly an equal way. After formulating the algorithm, we validate in a set of longitudinal 3D brain MRI pairs that the transformations the symmetrical algorithm produces are indeed significantly more robust to switching the order of image inputs than traditional geodesic shooting.

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References

  1. Ashburner, J., Andersson, J.L.R., Friston, K.J.: High-dimensional image registration using symmetric priors. NeuroImage 9, 619–628 (1999)

    Article  Google Scholar 

  2. Avants, B.B., Epstein, C.L., Grossman, M., Gee, J.C.: Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain. Med. Image Anal. 12(1), 26–41 (2008)

    Article  Google Scholar 

  3. Avants, B.B., Tustison, N.J., Song, G., Cook, P.A., Klein, A., Gee, J.C.: A reproducible evaluation of ants similarity metric performance in brain image registration. NeuroImage 54(3), 2033–2044 (2011)

    Article  Google Scholar 

  4. Beg, M.F., Miller, M.I., Trouvé, A., Younes, L.: Computing large deformation metric mappings via geodesic flows of diffeomorphisms. Int. J. Comput. Vis. 61(2), 139–157 (2005)

    Article  Google Scholar 

  5. Christensen, G.E., Johnson, H.J.: Consistent image registration. IEEE Trans. Med. Imaging 20(7), 568–582 (2001)

    Article  Google Scholar 

  6. Fleishman, G.M., Gutman, B.A., Fletcher, P.T., Thompson, P.M.: Simultaneous longitudinal registration with group-wise similarity prior. In: Ourselin, S., Alexander, D.C., Westin, C.-F., Cardoso, M.J. (eds.) IPMI 2015. LNCS, vol. 9123, pp. 746–757. Springer, Cham (2015). doi:10.1007/978-3-319-19992-4_59

    Chapter  Google Scholar 

  7. Hua, X., Ching, C.R.K., Mezher, A., Gutman, B., Hibar, D.P., Bhatt, P., Leow, A.D., Jack Jr., C.R., Bernstein, M., Weiner, M.W., Thompson, P.M.: MRI-based brain atrophy rates in ADNI phase 2: acceleration and enrichment considerations for clinical trials. Neurobiology of Aging 37, 26–37 (2016)

    Article  Google Scholar 

  8. Hua, X., Hibar, D.P., Ching, C.R.K., Boyle, C.P., Rajagopalan, P., Gutman, B., Leow, A.D., Toga, A.W., Jack Jr., C.R., Harvey, D.J., Weiner, M.W., Thompson, P.M.: Unbiased tensor-based morphometry: improved robustness and sample size estimates for Alzheimer’s disease clinical trials. NeuroImage 66, 648–661 (2013)

    Article  Google Scholar 

  9. Miller, M.I., Trouvé, A., Younes, L.: Geodesic shooting for computational anatomy. J. Math. Imaging Vis. 24(2), 209–228 (2006)

    Article  MathSciNet  Google Scholar 

  10. Singh, N., Hinkle, J., Joshi, S., Fletcher, P.: A vector momenta formulation of diffeomorphisms for improved geodesic regression and atlas construction. In: Proceedings of the 2013 IEEE 10th International Symposium on Biomedical Imaging (ISBI), pp. 1219–1222 (2013)

    Google Scholar 

  11. Vemuri, P., Senjem, M.L., Gunter, J.L., Lundt, E.S., Tosakulwong, N., Weigand, S.D., Borowski, B.J., Bernstein, M.A., Zuk, S.M., Lowe, V.J., Knopman, D.S., Petersen, R.C., Fox, N.C., Thompson, P.M., Weiner, M.W., Jack Jr., C.R.: Accelerated vs. unaccelerated serial MRI based TBM-SyN measurements for clinical trials in Alzheimer’s disease. NeuroImage 113, 61–69 (2015)

    Article  Google Scholar 

  12. Vialard, F.X., Risser, L., Rueckert, D., Cotter, C.J.: Diffeomorphic 3D image registration via geodesic shooting using an efficient adjoint calculation. Int. J. Comput. Vis. 97(2), 229–241 (2012)

    Article  MathSciNet  MATH  Google Scholar 

  13. Yushkevich, P.A., Avants, B.B., Das, S.R., Pluta, J., Altinay, M., Craige, C.: Bias in estimation of hippocampal atrophy using deformation-based morphometry arises from asymmetric global normalization: an illustration in ADNI 3 t MRI data. NeuroImage 50(2), 434–445 (2010)

    Article  Google Scholar 

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Correspondence to Greg M. Fleishman .

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Fleishman, G.M., Thomas Fletcher, P., Thompson, P.M. (2017). Symmetric Interleaved Geodesic Shooting in Diffeomorphisms. In: Niethammer, M., et al. Information Processing in Medical Imaging. IPMI 2017. Lecture Notes in Computer Science(), vol 10265. Springer, Cham. https://doi.org/10.1007/978-3-319-59050-9_46

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  • DOI: https://doi.org/10.1007/978-3-319-59050-9_46

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  • Publisher Name: Springer, Cham

  • Print ISBN: 978-3-319-59049-3

  • Online ISBN: 978-3-319-59050-9

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