Skip to main content

Chromatin Immunoprecipitation of Histone Modifications in Fission Yeast

  • Protocol
  • First Online:
Histones

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1528))

Abstract

Chromatin immunoprecipitation (ChIP) is a sensitive, accurate, and reliable technique widely used to analyze protein-DNA interactions at specific binding sites in vivo. It has been a particularly powerful technique for mapping of histone modification patterns both at individual loci and genome-wide. Here we provide a detailed protocol for ChIP of histone modifications associated with active transcription in fission yeast (Schizosaccharomyces pombe).

This is a preview of subscription content, log in via an institution to check access.

Access this chapter

Protocol
USD 49.95
Price excludes VAT (USA)
  • Available as PDF
  • Read on any device
  • Instant download
  • Own it forever
eBook
USD 109.00
Price excludes VAT (USA)
  • Available as EPUB and PDF
  • Read on any device
  • Instant download
  • Own it forever
Softcover Book
USD 139.00
Price excludes VAT (USA)
  • Compact, lightweight edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info
Hardcover Book
USD 159.99
Price excludes VAT (USA)
  • Durable hardcover edition
  • Dispatched in 3 to 5 business days
  • Free shipping worldwide - see info

Tax calculation will be finalised at checkout

Purchases are for personal use only

Institutional subscriptions

References

  1. Bannister AJ, Kouzarides T (2011) Regulation of chromatin by histone modifications. Cell Res 21:381–395

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  2. Aparicio O, Geisberg JV, Sekinger E, Yang A, Moqtaderi Z et al (2005) Chromatin immunoprecipitation for determining the association of proteins with specific genomic sequences in vivo. Curr Protoc Mol Biol Chapter 21:Unit 21.23

    Google Scholar 

  3. Li B, Carey M, Workman JL (2007) The role of chromatin during transcription. Cell 128:707–719

    Article  CAS  PubMed  Google Scholar 

  4. Smolle M, Workman JL (2013) Transcription-associated histone modifications and cryptic transcription. Biochim Biophys Acta 1829:84–97

    Article  CAS  PubMed  Google Scholar 

  5. Rhind N, Chen Z, Yassour M, Thompson DA, Haas BJ et al (2011) Comparative functional genomics of the fission yeasts. Science 332:930–936

    Article  CAS  PubMed  PubMed Central  Google Scholar 

  6. Moazed D (2009) Small RNAs in transcriptional gene silencing and genome defence. Nature 457:413–420

    Article  CAS  PubMed  PubMed Central  Google Scholar 

Download references

Author information

Authors and Affiliations

Authors

Corresponding author

Correspondence to Jason C. Tanny .

Editor information

Editors and Affiliations

Rights and permissions

Reprints and permissions

Copyright information

© 2017 Springer Science+Business Media New York

About this protocol

Cite this protocol

Mbogning, J., Tanny, J.C. (2017). Chromatin Immunoprecipitation of Histone Modifications in Fission Yeast. In: Guillemette, B., Gaudreau, L. (eds) Histones. Methods in Molecular Biology, vol 1528. Humana Press, New York, NY. https://doi.org/10.1007/978-1-4939-6630-1_12

Download citation

  • DOI: https://doi.org/10.1007/978-1-4939-6630-1_12

  • Published:

  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-6628-8

  • Online ISBN: 978-1-4939-6630-1

  • eBook Packages: Springer Protocols

Publish with us

Policies and ethics