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EMS Mutagenesis of Maize Pollen

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Plant Embryogenesis

Part of the book series: Methods in Molecular Biology ((MIMB,volume 2122))

Abstract

Effective mutagenesis is critical for connecting traits of interest to specific plant genes. The development of site-directed mutagenesis and sequenced-indexed genetics resources in maize allows for targeted analysis of individual genes. These reverse genetics approaches have the potential for confirmation bias by only studying candidate genes for association with traits of interest. Genetic screens of induced, random mutations are important for identifying novel loci as well as interacting factors for known mutant loci. Chemical mutagenesis provides very high mutation rates and can be used for a variety of screen designs. This chapter provides an updated protocol for ethyl methanesulfonate (EMS) mutagenesis of maize pollen using paraffin or mineral oil. Mutagenesis occurs in mature pollen causing nonconcordant endosperm and embryo genotypes as well as sectored M1 plants. Considerations for these factors in genetic screens are discussed.

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References

  1. Coe EH Jr (2001) The origins of maize genetics. Nat Rev Genet 2:898–905

    Article  CAS  Google Scholar 

  2. McClintock B (1948) Mutable loci in maize. In: Carnegie Inst. wash. Year book, vol 47. Cold Spring Harbor, New York, pp 155–169

    Google Scholar 

  3. Candela H, Hake S (2008) The art and design of genetic screens: maize. Nat Rev Genet 9:192–203

    Article  CAS  Google Scholar 

  4. Gault CM, Settles AM (2014) Functional genomics. In: Wusirika R, Bohn M, Lai J (eds) Genetics, genomics, and breeding of maize. CRC Press, Boca Raton, FL, USA, pp 131–154

    Google Scholar 

  5. Neuffer MG, Coe EH Jr (1977) Paraffin oil technique for treating mature corn pollen with chemical mutagens. Maydica 23:21–28

    Google Scholar 

  6. Neuffer MG, Sheridan WF (1980) Defective kernel mutants of maize. I. Genetic and lethality studies. Genetics 95:929–944

    CAS  PubMed  PubMed Central  Google Scholar 

  7. Brunelle DC, Clark JK, Sheridan WF (2017) Genetic screening for EMS-induced maize embryo-specific mutants altered in embryo morphogenesis. G3 (Bethesda) 7:3559–3570

    Article  CAS  Google Scholar 

  8. Bai F, Reinheimer R, Durantini D, Kellogg EA, Schmidt RJ (2012) TCP transcription factor, BRANCH ANGLE DEFECTIVE 1 (BAD1), is required for normal tassel branch angle formation in maize. Proc Natl Acad Sci U S A 109:12225–12230

    Article  CAS  Google Scholar 

  9. Fouquet R, Martin F, Fajardo DS, Gault CM, Gómez E, Tseung CW, Policht T, Hueros G, Settles AM (2011) Maize rough endosperm3 encodes an RNA splicing factor required for endosperm cell differentiation and has a nonautonomous effect on embryo development. Plant Cell 23:4280–4297

    Article  CAS  Google Scholar 

  10. Gallavotti A, Long JA, Stanfield S, Yang X, Jackson D, Vollbrecht E, Schmidt RJ (2010) The control of axillary meristem fate in the maize ramosa pathway. Development 137:2849–2856

    Article  CAS  Google Scholar 

  11. Clark JK, Sheridan WF (1991) Isolation and characterization of 51 embryo-specific mutations of maize. Plant Cell 3:935–951

    Article  Google Scholar 

  12. McCarty DR, Settles AM, Suzuki M, Tan BC, Latshaw S, Porch T, Robin K, Baier J, Avigne W, Lai J, Messing J, Koch KE, Hannah LC (2005) Steady-state transposon mutagenesis in inbred maize. Plant J 44:52–61

    Article  CAS  Google Scholar 

  13. Bai F, Daliberti M, Bagadion A, Xu M, Li Y, Baier J, Tseung C, Evans M, Settles A (2016) Parent-of-origin-effect rough endosperm mutants in maize. Genetics 204:221–231

    Article  CAS  Google Scholar 

  14. Grossniklaus U, Vielle-Calzada JP, Hoeppner MA, Gagliano WB (1998) Maternal control of embryogenesis by MEDEA, a polycomb group gene in Arabidopsis. Science 280:446–450

    Article  CAS  Google Scholar 

  15. Gustin JL, Boehlein SK, Shaw JR, Junior W, Settles AM, Webster A, Tracy WF, Hannah LC (2018) Ovary abortion is prevalent in diverse maize inbred lines and is under genetic control. Sci Rep 8:13032

    Article  Google Scholar 

  16. Neuffer MG (1994) Mutagenesis. In: Freeling M, Walbot V (eds) The maize handbook. Springer, New York, p 212

    Chapter  Google Scholar 

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Acknowledgments

This work was supported by grants from NIFA (SCRI-2018-51181-28419), the NSF (IOS-1444456), and the Vasil-Monsanto Endowment.

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Correspondence to A. Mark Settles .

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Settles, A.M. (2020). EMS Mutagenesis of Maize Pollen. In: Bayer, M. (eds) Plant Embryogenesis. Methods in Molecular Biology, vol 2122. Humana, New York, NY. https://doi.org/10.1007/978-1-0716-0342-0_3

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  • DOI: https://doi.org/10.1007/978-1-0716-0342-0_3

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  • Publisher Name: Humana, New York, NY

  • Print ISBN: 978-1-0716-0341-3

  • Online ISBN: 978-1-0716-0342-0

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