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De Novo Assembly of Plasmids Using Yeast Recombinational Cloning

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The Genetic Manipulation of Staphylococci

Part of the book series: Methods in Molecular Biology ((MIMB,volume 1373))

Abstract

Molecular cloning is a cornerstone of modern biology laboratories. However, traditional cloning can be time-consuming and problematic. We outline herein a method that utilizes the endogenous gap repair system of yeast cells to clone and assemble DNA constructs. This system is simple, cheap, and requires minimal reagents. It can be used for the assembly of both simple (single DNA fragments) and complex (multiple DNA fragments) constructs into plasmids.

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References

  1. Gibson DG (2009) Synthesis of DNA fragments in yeast by one-step assembly of overlapping oligonucleotides. Nucleic Acids Res 37:6984–6990

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  2. Kitazono AA (2009) Improved gap-repair cloning method that uses oligonucleotides to target cognate sequences. Yeast 26:497–505

    Article  CAS  PubMed  Google Scholar 

  3. Kitazono AA (2011) Optimized protocols and plasmids for in vivo cloning in yeast. Gene 484:86–89

    Article  CAS  PubMed  Google Scholar 

  4. Hinnen A, Hicks JB, Fink GR (1978) Transformation of yeast. Proc Natl Acad Sci U S A 75:1929–1933

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  5. Orr-Weaver TL, Szostak JW, Rothstein RJ (1981) Yeast transformation: a model system for the study of recombination. Proc Natl Acad Sci U S A 78:6354–6358

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  6. Joska TM, Mashruwala A, Boyd JM et al (2014) A universal cloning method based on yeast homologous recombination that is simple, efficient, and versatile. J Microbiol Methods 100C:46–51

    Article  Google Scholar 

  7. Gibson DG, Benders GA, Axelrod KC et al (2008) One-step assembly in yeast of 25 overlapping DNA fragments to form a complete synthetic Mycoplasma genitalium genome. Proc Natl Acad Sci U S A 105:20404–20409

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  8. Luong TT, Lee CY (2007) Improved single-copy integration vectors for Staphylococcus aureus. J Microbiol Methods 70:186–190

    Article  PubMed Central  CAS  PubMed  Google Scholar 

  9. Sabine Ehrt DS (2003) Isolation of plasmids from E. coli by alkaline lysis. Methods Mol Biol 235:75–78

    PubMed  Google Scholar 

  10. Novick RP (1991) Genetic systems in Staphylococci. Methods Enzymol 204:587–636

    Article  CAS  PubMed  Google Scholar 

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Correspondence to Jeffrey M. Boyd Ph.D. .

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© 2015 Springer Science+Business Media New York

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Mashruwala, A.A., Boyd, J.M. (2015). De Novo Assembly of Plasmids Using Yeast Recombinational Cloning. In: Bose, J. (eds) The Genetic Manipulation of Staphylococci. Methods in Molecular Biology, vol 1373. Humana Press, New York, NY. https://doi.org/10.1007/7651_2015_275

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  • DOI: https://doi.org/10.1007/7651_2015_275

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  • Publisher Name: Humana Press, New York, NY

  • Print ISBN: 978-1-4939-3157-6

  • Online ISBN: 978-1-4939-3158-3

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