Abstract
Heme-thiolate enzymes, notably cytochromes P450 and nitric oxide synthases, use dioxygen to oxygenatesubstrates. Photoactive metal-diimine molecular wires that are capable of effecting rapid redox state changesat buried active sites have been developed to generate intermediates in the catalytic cycles of these enzymes.Wires that feature a photoactive head group tethered to an active-site ligand bind P450CAM and induciblenitric oxide synthase (iNOS) primarily by hydrophobic interactions. The wire-binding specificity of eachenzyme is critically dependent on the structural flexibility of the protein. P450CAM:wire conjugates canadopt open or partially open conformations, thereby accommodating a wide range of wires, whereas onlylong wires with smaller [Re(CO)3(bpy)Im]+ head groupsare able to bind tightly in the rigid active-site channel of iNOS. Dansyl-terminated molecular wires functionas highly sensitive and isoform specific fluorescent sensors for P450CAM.
Access this chapter
Tax calculation will be finalised at checkout
Purchases are for personal use only
Preview
Unable to display preview. Download preview PDF.
Abbreviations
- Ad:
-
adamantyl
- BH4 :
-
tetrahydrobiopterin
- CPR:
-
cytochrome P450 reductase
- EB:
-
ethylbenzene
- eNOS:
-
endothelial nitric oxide synthase
- ET:
-
electron transfer
- FAD:
-
flavin adenosine dinucleotide
- FET:
-
fluorescence energy transfer
- FMN:
-
flavin mononucleotide
- iNOS:
-
inducible nitric oxide synthase
- iNOS oxy :
-
oxygenase domain of inducible NOS
- NADPH:
-
nicotinamide adenosine dinucleotide hydride
- NHE:
-
normal hydrogen electrode
- nNOS:
-
neuronal nitric oxide synthase
- NOS:
-
nitric oxide synthase
- P450:
-
cytochrome P450
- P450BM3:
-
cytochrome P450 from Bacillus megaterium
- P450CAM:
-
cytochrome P450 from Pseudomonas putida
- pdx:
-
putidaredoxin
- tm:
-
tetramethyl
References
Roberts GA, Grogan G, Greter A, Flitsch SL, Turner NJ (2002) J Bacteriol 184:3898
Boddupalli SS, Oster T, Estabrook RW, Peterson JA (1992) J Biol Chem 267:10375
Warman AJ, Roitel O, Neeli R, Girvan HM, Seward HE, Murray SA, McLean KJ, Joyce MG, Toogood H, Holt RA, Leys D, Scrutton NS, Munro AW (2005) Biochem Soc Trans 33:747
Fuziwara S, Sagami I, Rozhkova E, Craig D, Noble MA, Munro AW, Chapman SK, Shimizu T (2002) J Inorg Biochem 91:515
Low DW, Winkler JR, Gray HB (1996) J Am Chem Soc 118:117
Wilker JJ, Dmochowski IJ, Dawson JH, Winkler JR, Gray HB (1999) Angew Chem Int Ed 38:90
Dmochowski IJ, Dunn AR, Wilker JJ, Crane BR, Green MT, Dawson JH, Sligar SG, Winkler JR, Gray HB (2002) Method Enzymol 357:120
Dunn AR, Dmochowski IJ, Bilwes AM, Gray HB, Crane BR (2001) Proc Natl Acad Sci USA 98:12420 x
Hays A-MA, Dunn AR, Chiu R, Gray HB, Stout CD, Goodin DB (2004) J Mol Biol 344:455
Dunn AR, Hays A-MA, Goodin DB, Stout CD, Chiu R, Winkler JR, Gray HB (2002) J Am Chem Soc 124:10254
Dmochowski IJ, Crane BR, Wilker JJ, Winkler JR, Gray HB (1999) Proc Natl Acad Sci USA 96:12987
Belliston-Bittner W, Dunn AR, Nguyen YHL, Stuehr DJ, Winkler JR, Gray HB (2005) J Am Chem Soc 127:15907
Dunn AR, Belliston-Bittner W, Winkler JR, Getzoff ED, Stuehr DJ, Gray HB (2005) J Am Chem Soc 127:5169
Hess CR, Juda GA, Dooley DM, Amii RN, Hill MG, Winkler JR, Gray HB (2003) J Am Chem Soc 125(24):7156
Contakes SM, Juda GA, Langley DB, Halpern-Manners NW, Duff AP, Dunn AR, Gray HB, Dooley DM, Guss JM, Freeman HC (2005) Proc Natl Acad Sci USA 102:13451
Gray HB, Dunn AR, Belliston W, Leigh BS, Contakes SM, Winkler JR (2003) 225th ACS National Meeting, New Orleans, LA, USA
Kenyon V, Chorny I, Carvaja SW, Holman TR, Jacobson MP (2006) J Med Chem 49:1356
Lewis DFV (2001) Guide to Cytochromes P450: Structure and Function. CRC Press, New York
Ortiz de Montellano PR (1995) Cytochrome P450: Structure, Mechanism, and Biochemistry. Plenum Press, New York, p 652
Phillips IR, Shephard EA (1998) Methods in Molecular Biology, vol 107. Humana Press, Totowa, p 482
Sono M, Roach MP, Coulter ED, Dawson JH (1996) Chem Rev 96:2842
Guengerich FP (2003) Mol Interv 3:194
Glieder A, Farinas ET, Arnold FH (2002) Nat Biotechnol 20:1135
Joseph S, Rusling JF, Lvov YM, Friedberg T, Fuhr U (2003) Biochem Pharmacol 65:1817
Davydov R, Markris TM, Kofman V, Werst DE, Sligar SG, Hoffman BM (2001) J Am Chem Soc 123:1403
Egawa T, Shimada H, Ishimura Y (1994) Biochem Biophys Res Comm 201:1464
Schlichting I, Berendzen J, Chu K, Stock AM, Maves SA, Benson DE, Sweet RM, Ringe D, Petsko GA, Sligar SG (2000) Science 287:1615
Glascock MC, Ballou DP, Dawson JH (2005) J Biol Chem 280:42134
Udit A, Contakes SM, Gray HB (2007) Met Ions Life Sci 3:in press
Udit A (2005) P450 BM3 electrochemistry and electrocatalysis. PhD, California Institute of Technology
Noble M, Miles C, Chapman S, Lysek D, Mackay A, Reid G, Hanzlik R, Munro A (1999) Biochem J 339:371
Sevrioukova IF, Li H, Zhang H, Petersson JA, Poulos TL (1999) Proc Natl Acad Sci USA 96:1863
Dunn AR, Dmochowski IJ, Winkler JR, Gray HB (2003) J Am Chem Soc 125:12450
Dunn AR (2003) Sensitizer-linked substrates as probes of heme enzyme structure and catalysis. PhD, California Institute of Technology
Dmochowski IJ (2000) Probing Cytochrome P450 with Sensitizer-linked Substrates. Ph.D., California Institute of Technology
Belliston Bittner W (2005) Ultrafast Photoreduction of Nitric Oxide Synthase by Electron Tunneling Wires. PhD, California Institute of Technology
Lipscomb JD (1980) Biochemistry 19:3590
Poulos TL, Howard AJ (1987) Biochemistry 26:8165
Dmochowski IJ, Winkler JR, Gray HB (2000) J Inorg Biochem 81:221
Raag R, Poulos TL (1991) Biochemistry 30:2674
Ravichandran KG, Boddupalli SS, Hasemann CA, Peterson JA, Deisenhofer J (1993) Science 261:731
Li H, Poulos TL (1997) Nat Struct Biol 4:140
Park SY, Shimizu H, Adachi S, Nakagawa A, Tanaka I, Nakahara K, Shoun H, Obayashi E, Nakamura H, Iizuka T, Shiro Y (1997) Nat Struct Biol 4:827
Hasemann CA, Kurumbail RG, Boddupalli SS, Peterson JA, Deisenhofer J (1995) Structure 2:41
Williams PA, Cosme J, Sridhar V, Johnson EF, McRee DE (2000) Molecular Cell 5:121
DiPrimo C, Hoa GHB, Deprez E, Douzou P, Sligar SG (1993) Biochemistry 32:3671
DiPrimo C, Deprez E, Sligar SG, Hoa GHB (1997) Biochemistry 36:112
Ueng Y-F, Kuwabara T, Chun Y-J, Guengerich FP (1997) Biochemistry 36:371
Podust LM, Poulos TL, Waterman MR (2001) Proc Natl Acad Sci USA 98:3068
Paulsen MD, Ornstein RL (1995) Proteins 21:237
Poulos TL (1995) Curr Opin Struct Biol 5:767
Ludemann SK, Lounnas V, Wade RC (2000) J Mol Biol 303:797
Poulos TL, Finzel BC, Gunsalus IC, Wagner GC, Kraut J (1985) J Biol Chem 260:16122
Marletta MA, Hurshman AR, Rusche KM (1998) Curr Opin Chem Biol 2:656
Stuehr DJ (1999) Biochim Biophys Acta-Bioenerget 1411:217
Daff S, Chapman S, Turner K, Holt R, Govindaraj S, Poulos T, Munro A (1997) Biochemistry 36:13816
Dunn AR, Belliston-Bittner W, Winkler JR, Getzoff ED, Stuehr DJ, Gray HB (2005) J Am Chem Soc 127:5169
Ghosh DK, Wu CQ, Pitters E, Moloney M, Werner ER, Mayer B, Stuehr DJ (1997) Biochemistry 36:10609
Nguyen YHL (2006) Wiring inducible nitric oxide synthase. PhD, California Institute of Technology
Gerstein M (1992) Acta Cryst Sec A 48:271
Acknowledgments
Figure 11 was adopted from a version prepared by Alex Dunn. We thank him and others in the Caltech molecular wires group (Ivan Dmochowski, Jon Wilker, Corinna Hess, Wendy Belliston-Bittner, Nick Halpern-Manners) for contributions that are summarized in this chapter. Our work is supported by NIH, NSF, the Ellison Medical Foundation Senior Scholar Award in Aging (to HBG), and the Arnold and Mabel Beckman Foundation.
Author information
Authors and Affiliations
Corresponding author
Editor information
Rights and permissions
Copyright information
© 2006 Springer-Verlag Berlin Heidelberg
About this chapter
Cite this chapter
Contakes, S.M., Nguyen, Y.H.L., Gray, H.B., Glazer, E.C., Hays, AM., Goodin, D.B. (2006). Conjugates of Heme-Thiolate Enzymes with Photoactive Metal-Diimine Wires. In: Yam, V.W.W. (eds) Photofunctional Transition Metal Complexes. Structure and Bonding, vol 123. Springer, Berlin, Heidelberg. https://doi.org/10.1007/430_2006_039
Download citation
DOI: https://doi.org/10.1007/430_2006_039
Published:
Publisher Name: Springer, Berlin, Heidelberg
Print ISBN: 978-3-540-36809-0
Online ISBN: 978-3-540-36810-6
eBook Packages: Chemistry and Materials ScienceChemistry and Material Science (R0)