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The Horn of Africa as a centre of barley diversification and a potential domestication site

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Abstract

According to a widely accepted theory on barley domestication, wild barley (Hordeum vulgare ssp. spontaneum) from the Fertile Crescent is the progenitor of all cultivated barley (H. vulgare ssp. vulgare). To determine whether barley has undergone one or more domestication events, barley accessions from three continents have been studied (a) using 38 nuclear SSR (nuSSRs) markers, (b) using five chloroplast SSR (cpSSR) markers yielding 5 polymorphic loci and (c) by detecting the differences in a 468 bp fragment from the non-coding region of chloroplast DNA. A clear separation was found between Eritrean/Ethiopian barley and barley from West Asia and North Africa (WANA) as well as from Europe. The data from chloroplast DNA clearly indicate that the wild barley (H. vulgare ssp. spontaneum) as it is found today in the “Fertile Crescent” might not be the progenitor of the barley cultivated in Eritrea (and Ethiopia). Consequently, an independent domestication might have taken place at the Horn of Africa.

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References

  • Abbo S, Lev-Yadun S, Ladizinsky G (2001) Tracing the wild genetic stocks of crop plants. Genome 44:309–310

    Article  PubMed  CAS  Google Scholar 

  • Åberg E (1949) The taxonomy and phylogeny of Hordeum L. sec. Cerealis Ands., with special reference to Tibetan barleys. Symb Bot Upsal 4:1–156

    Google Scholar 

  • Badr A, Müller K, Schäfer-Pregl R, El Rabez H, Effgen S, Ibrahim HH, Pozzi C, Rohde W, Salamini F (2000) On the origin and domestication history of barley (Hordeum vulgare). Mol Biol Evol 14:499–510

    Google Scholar 

  • Becker J, Heun M (1995) Barley microsatellites—allele variation and mapping. Plant Mol Biol 27:835–845

    Article  PubMed  CAS  Google Scholar 

  • Bjørnstad Å, Demissie A, Kilian A, Kleinhofs A (1997) The distinctness and diversity of Ethiopian barleys. Theor Appl Genet 94:514–521

    Article  Google Scholar 

  • von Bothmer R, Sato K, Komatsudam T, Yasuda S, Fischbeck G (2003) The domestication of cultivated barley. In: von Bothmer R, van Hintum T, Knüpffer H, Sato K (eds) Diversity in barley (Hordeum vulgare). Elsevier Science B V, Amsterdam, pp 9–27

    Google Scholar 

  • Ceccarelli S, Grando S, van Leur JAG (1987) Genetic diversity in barley landraces from Syria and Jordan. Euphytica 36:389–405

    Article  Google Scholar 

  • Demissie A, Bjørnstad Å, Kleinhofs A (1998) Restriction fragment length polymorphisms in landrace barleys from Ethiopia in relation to geographic, altitude and agro-ecological factors. Crop Sci 38:237–243

    Article  Google Scholar 

  • Excoffier L, Laval G, Schneider S (2005) Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evol Bioinf Online 1:47–50

    CAS  Google Scholar 

  • Fischbeck G (1992) Barley cultivar development in Europe—success in the past and possilbe changes in the future. In: Munk L (eds) Proceedings of the 6th barley genetics symposium. Munksgaard International, Copenhagen, pp 885–901

    Google Scholar 

  • Fröst S, Holme G, Asker S (1975) Flavonoid patterns and phylogeny of barley. Hereditas 79:133–142

    Article  PubMed  Google Scholar 

  • Garvin DF, Brown AHD, Burdon JJ (1997) Inheritance and chromosome locations of scald-resistance genes derived from Iranian and Turkish wild barleys. Theor Appl Genet 94:1086–1091

    Article  CAS  Google Scholar 

  • Harlan JR, Zohary D (1966) Distribution of wild wheats and barley. Science 153:1074–1089

    Article  PubMed  CAS  Google Scholar 

  • van Hintum TJL (1999) The general methodology for creating a core collection. In: Johnson RD, Hodgkin T (eds) Core collections for today and tomorrow. International Plant Genetic Resources Institute, Rome, pp 10–17

    Google Scholar 

  • Holwerda BC, Jana S, Crosbi WL (1986) Chloroplast and mitochondrial DNA variation in Hordeum vulgare and Hordeum spontaneum. Genetics 114:1271–1291

    PubMed  CAS  Google Scholar 

  • Jahoor A, Fischbeck G (1993) Identification of new genes for mildew resistance of barley at the Mla locus in lines derived from Hordeum spontaneum. Plant Breed 110:116–122

    Article  Google Scholar 

  • Jobb G (2004) TREEFINDER version of June 2004. http://www.treefinder-de

  • Liu K, Muse S (2005) PowerMarker: new genetic data analysis software. Version 3.23. http://www.powermarker.net

  • Liu Z-W, Biyashev RM, Saghai-Maroof AS (1996) Development of simple sequence repeat DNA markers and their integration into a barley linkage map. Theor Appl Genet 93:869–876

    CAS  Google Scholar 

  • Matus IA, Hayes PM (2002) Genetic diversity in three groups of barley germplasm assessed by simple sequence repeats. Genome 45:1095–1106

    Article  PubMed  CAS  Google Scholar 

  • Molina-Cano JL, Fra-Mon P, Salcedo G, Aragoncillo C, Roca de Togores F, García-Omedo F (1987) Morocco as a possible domestication center for barley: biochemical and agromorphological evidence. Theor Appl Genet 73:531–536

    Article  CAS  Google Scholar 

  • Molina-Cano JL, Moralejo M, Igartua E, Romagosa I (1999) Further evidence supporting Morocco as a centre of origin of barley. Theor Appl Genet 98:913–918

    Article  Google Scholar 

  • Molina-Cano JL, Russell JR, Moralejo MA, Escacena JL, Arias G, Powell W (2005) Chloroplast DNA microsatellite analysis supports a polyphyletic origin for barley. Theor Appl Genet 110:613–619

    Article  PubMed  CAS  Google Scholar 

  • Neale DB, Saghai-Maroof MA, Allard RW, Zhang Q, Jørgensen RA (1988) Chloroplast DNA diversity in populations of wild and cultivated barley. Genetics 120:1105–1110

    PubMed  CAS  Google Scholar 

  • Negassa M (1985) Patterns of phenotypic diversity in an Ethiopian barley collection, and the Arussi-Bale Highland as a center of origin of barley. Hereditas 102:139–150

    Google Scholar 

  • Nei M (1972) Genetic distance between populations. Am Nat 106:283–292

    Article  Google Scholar 

  • Nevo E (1998) Genetic diversity in wild cereals: regional and local studies and their bearing on conservation ex situ and in situ. Genet Resour Crop Evol 45:355–370

    Article  Google Scholar 

  • Piffanelli P, Ramsay L, Waugh R, Benabdelmouna A, D’Hont A, Hollricher K, Jørgensen JH, Schulze-Lefert P, Panstruga R (2004) A barley cultivation-associated polymorphism conveys resistance to powdery mildew. Nature 430:887–891

    Article  PubMed  CAS  Google Scholar 

  • Powell W, Machray G, Provan J (1996) Polymorphism revealed by simple sequence repeats. Trends Plant Sci 1:215–222

    Google Scholar 

  • Provan J, Russell J, Booth A, Powell W (1999) Polymorphic chloroplast simple sequence repeat primers for systematic and population studies in the genus Hordeum. Mol Ecol 8:505–511

    Article  PubMed  CAS  Google Scholar 

  • Provan J, Powell W, Hollingsworth PM (2001) Chloroplast microsatellites: new tools for studies in plant ecology and evolution. Trends Ecol Evol 16:142–147

    Article  PubMed  Google Scholar 

  • Ramsay L, Macaulay M, Ivanissevich SD, MacLean K, Cardle L, Fuller J, Edwards KJ, Tuvesson S, Morgante M, Massari A, Maestri E, Marmiroli N, Sjakste T, Ganal M, Powell W, Waugh R (2000) A simple sequence repeat-based linkage map of barley. Genetics 156:1997–2005

    PubMed  CAS  Google Scholar 

  • Russell J, Ellis RP, Thomas WTB, Waugh R, Provan J, Booth A, Fuller J, Lawrence P, Young G, Powell W (2000) A retrospective analysis of spring barley germplasm development from ‘foundation genotypes’ to currently successful cultivars. Mol Breed 6:553–568

    Article  Google Scholar 

  • Saghai Maroof MA, Soliman KM, Jørgensen RA, Allard RW (1984) Ribosomal DNA spacer-length polymorphisms in barley: Mendelian inheritance, chromosomal location, and population-dynamics. Proc Natl Acad Sci Unit States Am 81:8014–8018

    Article  CAS  Google Scholar 

  • Saltonstall K (2001) A set of primers for amplification of noncoding regions of chloroplast DNA in the grasses. Mol Ecol Notes 1:76–78

    Article  CAS  Google Scholar 

  • Small RL, Ryburn JA, Cronn R C, Seelanan T, Wendel JF (1998) The tortoise and the hare: choosing between noncoding plastome and nuclear Adh sequences for phylogeny reconstruction in a recently diverged plant group. Am J Bot 85:1301–1315

    Article  CAS  Google Scholar 

  • Smith SE (1989) Biparental inheritance of organelles and its implications in crop improvement. Plant Breed Rev 6:361–393

    Google Scholar 

  • Tanksley SD, McCouch SR (1997) Seed banks and molecular maps: unlocking genetic potential from the wild. Science 277:1063–1066

    Article  PubMed  CAS  Google Scholar 

  • Vanichanon A, Blake NK, Sherman JD, Talbert LE (2003) Multiple origins of allopolyploid Aegilops triuncialis. Theor Appl Genet 105:804–810

    Google Scholar 

  • Woodhead M, Russell J, Squirrell J, Hollingsworth PM, Mackenzie K, Gibby M, Powell W (2005) Comparative analysis of population genetic structure in Athyrium distentifolium (Pteridophyta) using AFLPs and SSRs from anonymous and transcribed gene regions. Mol Ecol 14:1681–1695

    Article  PubMed  CAS  Google Scholar 

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Acknowledgments

This research work is dedicated to our mentor, Dr. G. Fischbeck, Emeritus professor at Technical University of Munich, Germany. We would like to thank the Eritrean farmers for allowing us to sample the spikes from their fields. We thank Mr. M. H. Matougui (Consultant -ICARDA) who assisted with the barley collection. Dr. J. Valkoun (ICARDA) provided the barley landraces from WANA regions and wild barley from Syria, Jordan, and Turkey. The Moroccan wild barley was obtained from Dr. J. L. Molina-Cano, Centre UdL-IRTA, Lleiden, Spain and the wild barley from Ethiopia were obtained from Dr. H. Bockelman, National Small-Grain Collection, Aberdeen, Idaho, USA. We also thank Mr. T. Ghebremania for his advice on the collection sites in Eritrea. Further we would like to thank Annette Møller for technical assistance. The financial support for this research was provided by Danish International Development Assistance (DANIDA) and the Islamic Development Bank.

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Correspondence to Ahmed Jahoor.

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Communicated by F. Ordon.

Jihad Orabi and Gunter Backes have contributed equally to this work.

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Orabi, J., Backes, G., Wolday, A. et al. The Horn of Africa as a centre of barley diversification and a potential domestication site. Theor Appl Genet 114, 1117–1127 (2007). https://doi.org/10.1007/s00122-007-0505-5

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  • DOI: https://doi.org/10.1007/s00122-007-0505-5

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