Abstract
According to a widely accepted theory on barley domestication, wild barley (Hordeum vulgare ssp. spontaneum) from the Fertile Crescent is the progenitor of all cultivated barley (H. vulgare ssp. vulgare). To determine whether barley has undergone one or more domestication events, barley accessions from three continents have been studied (a) using 38 nuclear SSR (nuSSRs) markers, (b) using five chloroplast SSR (cpSSR) markers yielding 5 polymorphic loci and (c) by detecting the differences in a 468 bp fragment from the non-coding region of chloroplast DNA. A clear separation was found between Eritrean/Ethiopian barley and barley from West Asia and North Africa (WANA) as well as from Europe. The data from chloroplast DNA clearly indicate that the wild barley (H. vulgare ssp. spontaneum) as it is found today in the “Fertile Crescent” might not be the progenitor of the barley cultivated in Eritrea (and Ethiopia). Consequently, an independent domestication might have taken place at the Horn of Africa.
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References
Abbo S, Lev-Yadun S, Ladizinsky G (2001) Tracing the wild genetic stocks of crop plants. Genome 44:309–310
Åberg E (1949) The taxonomy and phylogeny of Hordeum L. sec. Cerealis Ands., with special reference to Tibetan barleys. Symb Bot Upsal 4:1–156
Badr A, Müller K, Schäfer-Pregl R, El Rabez H, Effgen S, Ibrahim HH, Pozzi C, Rohde W, Salamini F (2000) On the origin and domestication history of barley (Hordeum vulgare). Mol Biol Evol 14:499–510
Becker J, Heun M (1995) Barley microsatellites—allele variation and mapping. Plant Mol Biol 27:835–845
Bjørnstad Å, Demissie A, Kilian A, Kleinhofs A (1997) The distinctness and diversity of Ethiopian barleys. Theor Appl Genet 94:514–521
von Bothmer R, Sato K, Komatsudam T, Yasuda S, Fischbeck G (2003) The domestication of cultivated barley. In: von Bothmer R, van Hintum T, Knüpffer H, Sato K (eds) Diversity in barley (Hordeum vulgare). Elsevier Science B V, Amsterdam, pp 9–27
Ceccarelli S, Grando S, van Leur JAG (1987) Genetic diversity in barley landraces from Syria and Jordan. Euphytica 36:389–405
Demissie A, Bjørnstad Å, Kleinhofs A (1998) Restriction fragment length polymorphisms in landrace barleys from Ethiopia in relation to geographic, altitude and agro-ecological factors. Crop Sci 38:237–243
Excoffier L, Laval G, Schneider S (2005) Arlequin ver. 3.0: an integrated software package for population genetics data analysis. Evol Bioinf Online 1:47–50
Fischbeck G (1992) Barley cultivar development in Europe—success in the past and possilbe changes in the future. In: Munk L (eds) Proceedings of the 6th barley genetics symposium. Munksgaard International, Copenhagen, pp 885–901
Fröst S, Holme G, Asker S (1975) Flavonoid patterns and phylogeny of barley. Hereditas 79:133–142
Garvin DF, Brown AHD, Burdon JJ (1997) Inheritance and chromosome locations of scald-resistance genes derived from Iranian and Turkish wild barleys. Theor Appl Genet 94:1086–1091
Harlan JR, Zohary D (1966) Distribution of wild wheats and barley. Science 153:1074–1089
van Hintum TJL (1999) The general methodology for creating a core collection. In: Johnson RD, Hodgkin T (eds) Core collections for today and tomorrow. International Plant Genetic Resources Institute, Rome, pp 10–17
Holwerda BC, Jana S, Crosbi WL (1986) Chloroplast and mitochondrial DNA variation in Hordeum vulgare and Hordeum spontaneum. Genetics 114:1271–1291
Jahoor A, Fischbeck G (1993) Identification of new genes for mildew resistance of barley at the Mla locus in lines derived from Hordeum spontaneum. Plant Breed 110:116–122
Jobb G (2004) TREEFINDER version of June 2004. http://www.treefinder-de
Liu K, Muse S (2005) PowerMarker: new genetic data analysis software. Version 3.23. http://www.powermarker.net
Liu Z-W, Biyashev RM, Saghai-Maroof AS (1996) Development of simple sequence repeat DNA markers and their integration into a barley linkage map. Theor Appl Genet 93:869–876
Matus IA, Hayes PM (2002) Genetic diversity in three groups of barley germplasm assessed by simple sequence repeats. Genome 45:1095–1106
Molina-Cano JL, Fra-Mon P, Salcedo G, Aragoncillo C, Roca de Togores F, García-Omedo F (1987) Morocco as a possible domestication center for barley: biochemical and agromorphological evidence. Theor Appl Genet 73:531–536
Molina-Cano JL, Moralejo M, Igartua E, Romagosa I (1999) Further evidence supporting Morocco as a centre of origin of barley. Theor Appl Genet 98:913–918
Molina-Cano JL, Russell JR, Moralejo MA, Escacena JL, Arias G, Powell W (2005) Chloroplast DNA microsatellite analysis supports a polyphyletic origin for barley. Theor Appl Genet 110:613–619
Neale DB, Saghai-Maroof MA, Allard RW, Zhang Q, Jørgensen RA (1988) Chloroplast DNA diversity in populations of wild and cultivated barley. Genetics 120:1105–1110
Negassa M (1985) Patterns of phenotypic diversity in an Ethiopian barley collection, and the Arussi-Bale Highland as a center of origin of barley. Hereditas 102:139–150
Nei M (1972) Genetic distance between populations. Am Nat 106:283–292
Nevo E (1998) Genetic diversity in wild cereals: regional and local studies and their bearing on conservation ex situ and in situ. Genet Resour Crop Evol 45:355–370
Piffanelli P, Ramsay L, Waugh R, Benabdelmouna A, D’Hont A, Hollricher K, Jørgensen JH, Schulze-Lefert P, Panstruga R (2004) A barley cultivation-associated polymorphism conveys resistance to powdery mildew. Nature 430:887–891
Powell W, Machray G, Provan J (1996) Polymorphism revealed by simple sequence repeats. Trends Plant Sci 1:215–222
Provan J, Russell J, Booth A, Powell W (1999) Polymorphic chloroplast simple sequence repeat primers for systematic and population studies in the genus Hordeum. Mol Ecol 8:505–511
Provan J, Powell W, Hollingsworth PM (2001) Chloroplast microsatellites: new tools for studies in plant ecology and evolution. Trends Ecol Evol 16:142–147
Ramsay L, Macaulay M, Ivanissevich SD, MacLean K, Cardle L, Fuller J, Edwards KJ, Tuvesson S, Morgante M, Massari A, Maestri E, Marmiroli N, Sjakste T, Ganal M, Powell W, Waugh R (2000) A simple sequence repeat-based linkage map of barley. Genetics 156:1997–2005
Russell J, Ellis RP, Thomas WTB, Waugh R, Provan J, Booth A, Fuller J, Lawrence P, Young G, Powell W (2000) A retrospective analysis of spring barley germplasm development from ‘foundation genotypes’ to currently successful cultivars. Mol Breed 6:553–568
Saghai Maroof MA, Soliman KM, Jørgensen RA, Allard RW (1984) Ribosomal DNA spacer-length polymorphisms in barley: Mendelian inheritance, chromosomal location, and population-dynamics. Proc Natl Acad Sci Unit States Am 81:8014–8018
Saltonstall K (2001) A set of primers for amplification of noncoding regions of chloroplast DNA in the grasses. Mol Ecol Notes 1:76–78
Small RL, Ryburn JA, Cronn R C, Seelanan T, Wendel JF (1998) The tortoise and the hare: choosing between noncoding plastome and nuclear Adh sequences for phylogeny reconstruction in a recently diverged plant group. Am J Bot 85:1301–1315
Smith SE (1989) Biparental inheritance of organelles and its implications in crop improvement. Plant Breed Rev 6:361–393
Tanksley SD, McCouch SR (1997) Seed banks and molecular maps: unlocking genetic potential from the wild. Science 277:1063–1066
Vanichanon A, Blake NK, Sherman JD, Talbert LE (2003) Multiple origins of allopolyploid Aegilops triuncialis. Theor Appl Genet 105:804–810
Woodhead M, Russell J, Squirrell J, Hollingsworth PM, Mackenzie K, Gibby M, Powell W (2005) Comparative analysis of population genetic structure in Athyrium distentifolium (Pteridophyta) using AFLPs and SSRs from anonymous and transcribed gene regions. Mol Ecol 14:1681–1695
Acknowledgments
This research work is dedicated to our mentor, Dr. G. Fischbeck, Emeritus professor at Technical University of Munich, Germany. We would like to thank the Eritrean farmers for allowing us to sample the spikes from their fields. We thank Mr. M. H. Matougui (Consultant -ICARDA) who assisted with the barley collection. Dr. J. Valkoun (ICARDA) provided the barley landraces from WANA regions and wild barley from Syria, Jordan, and Turkey. The Moroccan wild barley was obtained from Dr. J. L. Molina-Cano, Centre UdL-IRTA, Lleiden, Spain and the wild barley from Ethiopia were obtained from Dr. H. Bockelman, National Small-Grain Collection, Aberdeen, Idaho, USA. We also thank Mr. T. Ghebremania for his advice on the collection sites in Eritrea. Further we would like to thank Annette Møller for technical assistance. The financial support for this research was provided by Danish International Development Assistance (DANIDA) and the Islamic Development Bank.
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Communicated by F. Ordon.
Jihad Orabi and Gunter Backes have contributed equally to this work.
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Orabi, J., Backes, G., Wolday, A. et al. The Horn of Africa as a centre of barley diversification and a potential domestication site. Theor Appl Genet 114, 1117–1127 (2007). https://doi.org/10.1007/s00122-007-0505-5
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DOI: https://doi.org/10.1007/s00122-007-0505-5