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References
L.M. Adleman. Molecular computation of solutions to combinatorial problems. Science, 266:1021–1024, 1994.
J. Chen and N.C. Seeman. The synthesis from DNA of a molecule with the connectivity of a cube. Nature, 350:631–633, 1991.
D.R. Duckett, A.I.H. Murchie, S. Diekmann, E. von Kitzing, B. Kemper, and D.M.J. Lilley. The structure of the Holliday junction, and its resolution. Cell, 55:79–89, 1988.
T.-J. Fu and N.C. Seeman. DNA double-crossover molecules. Biochemistry, 32:3211–3220, 1993.
Y. He, Y. Chen, H. Liu, A.E. Ribbe, and C. Mao. Self-assembly of hexagonal DNA two-dimensional (2D) arrays. Journal of the American Chemical Society, 10:1021, 2005.
T.H. LaBean, H. Yan, J. Kopatsch, F. Liu, E. Winfree, J.H. Reif, and N.C. Seeman. Construction, analysis, ligation, and self-assembly of DNA triple crossover complexes. Journal of the American Chemical Society, 122:1848–1860, 2000.
C. Mao, T.H. LaBean, J.H. Reif, and N.C. Seeman. Logical computation using algorithmic self-assembly of DNA triple-crossover molecules. Nature, 407(6803):493–496, 2000.
C.D. Mao, W.Q. Sun, and N.C. Seeman. Designed two-dimensional DNA Holliday junction arrays visualized by atomic force microscopy. Journal of the American Chemical Society, 121:5437–5443, 1999.
A.I.H. Murchie, R.M. Clegg, E. von Kitzing, D.R. Duckett, S. Diekmann, and D.M.J. Lilley. Fluorescence energy transfer shows that the four-way DNA junction is a right-handed cross of antiparallel molecules. Nature, 341:763–766, 1989.
P.W.K. Rothemund, N. Papadakis, and E. Winfree. Algorithmic self-assembly of DNA Sierpinski triangles. PLoS Biology, 2(12):e424, 2004.
P.W.K. Rothemund. Generation of arbitrary nanoscale shapes and patterns by scaffolded DNA origami. (submitted), 2005.
P. W. K. Rothemund, A. Ekani-Nkodo, N. Papadakis, A. Kumar, D.K. Fygenson, E. Winfree. Design and characterization of programmable DNA nanotubes. Journal of the American Chemical Society, 26(50):16344–16353, 2004.
P.W.K. Rothemund. DNA self-assembly with floppy motifs — single crossover lattices. Foundations of Nanoscience, Self-Assembled Architectures and Devices, Proceedings of FNANO’05 (J.H. Reif eds.) 185–186, 2005.
N.C. Seeman. Nucleic-acid junctions and lattices. Journal of Theoretical Biology, 99:237–247, 1982.
N.C. Seeman. Construction of three-dimensional stick figures from branched DNA. DNA and Cell Biology, 7(10):475–486, 1991.
Z.Y. Shen, H. Yan, T. Wang, and N.C. Seeman. Paranemic crossover DNA: A generalized Holliday structure with applications in nanotechnology. Journal of the American Chemical Society, 126:1666–1674, 2004.
W.B. Sherman and N.C. Seeman. A precisely controlled DNA biped walking device. Nanoletters, 4(7):1203–1207, 2004.
W.B. Sherman and N.C. Seeman. The design of nucleic acid nanotubes. Journal of Biomolecular Structure and Dynamics, 20(6):930–931, 2003.
W.M. Shih, J.D. Quispe, and G.F. Joyce. A 1.7-kilobase single-stranded DNA that folds into a nanoscale octahedron. Nature, 427(6453):618–621, 2004.
J.S. Shin and N.A. Pierce. A synthetic DNA walker for molecular transport. Journal of the American Chemical Society, 126(35):10834–10835, 2004.
E. Winfree. On the computational power of DNA annealing and ligation. In R.J. Lipton and E.B. Baum, editors, DNA Based Computers, DIMACS, AMS Press, Providence, RI, 27:199–221, 1996.
E. Winfree, F. Liu, L.A. Wenzler, and N.C. Seeman. Design and self-assembly of two-dimensional DNA crystals. Nature, 394:539–544, 1998.
H. Yan, X. Zhang, Z. Shen, and N.C. Seeman. A robust DNA mechanical device controlled by hybridization topology. Nature, 415:62–65, 2002.
H. Yan, S.H. Park, G. Finkelstein, J.H. Reif, and T.H. LaBean. DNA-templated self-assembly of protein arrays and highly conductive nanowires. Science, 301:1882–1884, 2003.
P. Yin, H. Yan, X.G. Daniell, A.J. Turberfield, and J.H. Reif. A unidirectional DNA walker that moves autonomously along a track. Angewandte Chemie International Edition, 43(37):4906–4911, 2004.
B. Yurke, A.J. Turberfield, A.P. Mills, Jr., F.C. Simmel, and J.L. Neumann. A DNA-fuelled molecular machine made of DNA. Nature, 406:605–608, 2000.
Y. Zhang and N.C. Seeman. The construction of a DNA truncated octahedron. Journal of the American Chemical Society, 116:1661–1669, 1994.
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Rothemund, P.W.K. (2006). Scaffolded DNA Origami: from Generalized Multicrossovers to Polygonal Networks. In: Chen, J., Jonoska, N., Rozenberg, G. (eds) Nanotechnology: Science and Computation. Natural Computing Series. Springer, Berlin, Heidelberg. https://doi.org/10.1007/3-540-30296-4_1
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DOI: https://doi.org/10.1007/3-540-30296-4_1
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